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DUX4 and SNRNP200
Data Source:
BioGRID
(pull down)
DUX4
SNRNP200
Description
double homeobox 4
small nuclear ribonucleoprotein U5 subunit 200
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Nucleolus
Golgi Apparatus
Cytosol
Nuclear Membrane
Nucleus
Nucleoplasm
Spliceosomal Complex
U5 SnRNP
Membrane
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
U2-type Catalytic Step 1 Spliceosome
Catalytic Step 2 Spliceosome
Molecular Function
Transcription Regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Protein Binding
Sequence-specific Double-stranded DNA Binding
RNA Binding
RNA Helicase Activity
Helicase Activity
Protein Binding
ATP Binding
Identical Protein Binding
Biological Process
Regulation Of Transcription By RNA Polymerase II
Apoptotic Process
Multicellular Organism Development
Negative Regulation Of Cell Population Proliferation
Positive Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of G0 To G1 Transition
Cis Assembly Of Pre-catalytic Spliceosome
Spliceosome Conformational Change To Release U4 (or U4atac) And U1 (or U11)
MRNA Splicing, Via Spliceosome
Osteoblast Differentiation
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Drugs
Diseases
Retinitis pigmentosa (RP)
GWAS
Interacting Genes
124 interacting genes:
ACTG1
AP2A1
AP3D1
ARF1
ATP5F1C
C1QBP
CAND1
CAPN2
CAVIN1
CCT6A
CLTC
COPA
CSE1L
DDX21
DDX3X
DDX5
DES
DHX30
DHX36
DHX9
DYNC1H1
EEF2
EFTUD2
ENO1
EP300
EPRS1
FASN
FLNA
GAPDH
GARS1
HMGB1
HNRNPA1L2
HNRNPF
HNRNPH1
HNRNPK
HNRNPM
HNRNPU
HSPD1
IARS1
IGF2BP1
IGF2BP3
ILF3
IQGAP1
LDHA
MARS1
MCM7
MTHFD1
MYBBP1A
MYH10
MYH9
MYL6B
NCL
NPM1
PABPC1
PABPC4
PARP1
PFAS
PKM
PPP2R1A
PRKDC
PRPF8
RAN
RPL10
RPL10A
RPL12
RPL13
RPL15
RPL17
RPL18
RPL19
RPL21
RPL22
RPL23
RPL23A
RPL27A
RPL3
RPL30
RPL31
RPL35
RPL36
RPL4
RPL6
RPL7
RPL7A
RPL8
RPL9
RPN1
RPS10
RPS13
RPS14
RPS15
RPS15A
RPS16
RPS17
RPS18
RPS2
RPS20
RPS24
RPS25
RPS3
RPS3A
RPS4X
RPS6
RPS7
RPS8
RPS9
SF3B1
SHMT2
SLC25A3
SLC25A5
SLC25A6
SNRNP200
SRSF3
TCP1
TUBB
TUBB2A
TUBB3
TUBB6
VDAC1
VDAC2
VIM
XRCC5
XRCC6
YBX1
34 interacting genes:
APC
BARD1
BCAS2
BRCA1
CHMP1B
DHX38
DUX4
ECT2
EFTUD2
ERG
GNMT
GRB2
HNRNPA1
HSPB1
LSM8
MATR3
MEGF10
PIN1
PRPF3
PRPF31
PRPF8
PTEN
RNF113A
SF3B2
SF3B3
SMNDC1
SNRNP40
SNW1
SUMO2
UBE2I
USP19
WBP4
YWHAB
YWHAG
Entrez ID
100288687
23020
HPRD ID
03391
Ensembl ID
ENSG00000260596
ENSG00000144028
Uniprot IDs
C3U3A0
Q9UBX2
O75643
PDB IDs
5Z2S
5Z2T
5Z6Z
5ZFW
5ZFY
5ZFZ
6A8R
6DFY
6E8C
6U81
6U82
2Q0Z
3JCR
4F91
4F92
4F93
4KIT
5O9Z
5URJ
5URK
5URM
5XJC
5YZG
5Z56
5Z57
5Z58
6AH0
6FF7
6ICZ
6QDV
6QW6
6QX9
6S8O
6S8Q
6S9I
7A5P
Enriched GO Terms of Interacting Partners
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Tagcloud (Intersection)
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