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SNRNP200 and MATR3
Data Source:
BioGRID
(two hybrid, affinity chromatography technology, affinity chromatography technology)
SNRNP200
MATR3
Description
small nuclear ribonucleoprotein U5 subunit 200
matrin 3
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U5 SnRNP
Membrane
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
U2-type Catalytic Step 1 Spliceosome
Catalytic Step 2 Spliceosome
Nucleus
Nuclear Inner Membrane
Membrane
Nuclear Matrix
Molecular Function
RNA Binding
RNA Helicase Activity
Helicase Activity
Protein Binding
ATP Binding
Identical Protein Binding
RNA Binding
Structural Molecule Activity
Protein Binding
Zinc Ion Binding
MiRNA Binding
Identical Protein Binding
Biological Process
Cis Assembly Of Pre-catalytic Spliceosome
Spliceosome Conformational Change To Release U4 (or U4atac) And U1 (or U11)
MRNA Splicing, Via Spliceosome
Osteoblast Differentiation
Activation Of Innate Immune Response
Heart Valve Development
Ventricular Septum Development
Posttranscriptional Regulation Of Gene Expression
Innate Immune Response
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Drugs
Diseases
Retinitis pigmentosa (RP)
Distal muscular dystrophies, including: Welander distal myopathy (WDM); Tibial muscular dystrophy (TMD); Nonaka distal myopathy with rimmed vacuoles (DMRV); Miyoshi myopathy (MM); Laing myopathy (MPD1); Distal nebulin myopathy (DNM); Distal desminopathy (MFM1); alpha-B Crystallinopathy (MFM2); Distal myotilinopathy (MFM3); Distal zaspopathy (MFM4); Distal myopathy 3 (MPD2, VCPDM)
GWAS
Body mass index (
26426971
)
Malaria (
31844061
)
Metabolite levels (
23823483
)
Interacting Genes
34 interacting genes:
APC
BARD1
BCAS2
BRCA1
CHMP1B
DHX38
DUX4
ECT2
EFTUD2
ERG
GNMT
GRB2
HNRNPA1
HSPB1
LSM8
MATR3
MEGF10
PIN1
PRPF3
PRPF31
PRPF8
PTEN
RNF113A
SF3B2
SF3B3
SMNDC1
SNRNP40
SNW1
SUMO2
UBE2I
USP19
WBP4
YWHAB
YWHAG
99 interacting genes:
AIMP2
AKTIP
CALM1
CDC42
EGFR
ERG
GFI1B
HNRNPK
HTR2B
KRT27
KRT34
LMNA
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
PCBP1
PCBP3
PLEKHG4
PTBP2
PTEN
RASD1
SNAP23
SNRNP200
SRPK2
TNFRSF21
TRAF1
TRAF6
TSGA10
TTF2
UBE2I
Entrez ID
23020
9782
HPRD ID
03391
05270
Ensembl ID
ENSG00000144028
ENSG00000015479
Uniprot IDs
O75643
A0A0R4J2E8
B3KM87
B4DF66
P43243
Q9H4N1
PDB IDs
2Q0Z
3JCR
4F91
4F92
4F93
4KIT
5O9Z
5URJ
5URK
5URM
5XJC
5YZG
5Z56
5Z57
5Z58
6AH0
6FF7
6ICZ
6QDV
6QW6
6QX9
6S8O
6S8Q
6S9I
7A5P
Enriched GO Terms of Interacting Partners
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Tagcloud (Difference)
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Tagcloud (Intersection)
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