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LSM6 and MCRS1
Data Source:
BioGRID
(two hybrid)
HPRD
(two hybrid)
LSM6
MCRS1
Description
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
microspherule protein 1
Image
No pdb structure
GO Annotations
Cellular Component
P-body
Nucleus
Nucleoplasm
U6 SnRNP
Nucleolus
Sno(s)RNA-containing Ribonucleoprotein Complex
Cytoplasm
Cytosol
Small Nuclear Ribonucleoprotein Complex
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
Lsm2-8 Complex
Histone Acetyltransferase Complex
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Endoplasmic Reticulum
Polysome
Dendrite
Ino80 Complex
Perikaryon
NSL Complex
MLL1 Complex
Molecular Function
RNA Binding
Protein Binding
Protein Heterodimerization Activity
G-quadruplex RNA Binding
Protein Binding
Poly(U) RNA Binding
Poly(G) Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Catabolic Process
TRNA Processing
RNA Splicing
Maturation Of SSU-rRNA
Exonucleolytic Catabolism Of Deadenylated MRNA
DNA Repair
DNA Recombination
Cellular Protein Modification Process
Viral Process
Protein Deubiquitination
Histone H4-K5 Acetylation
Histone H4-K8 Acetylation
Histone H4-K16 Acetylation
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Protein Localization To Nucleolus
Pathways
mRNA decay by 5' to 3' exoribonuclease
mRNA decay by 5' to 3' exoribonuclease
mRNA Splicing - Major Pathway
HATs acetylate histones
UCH proteinases
DNA Damage Recognition in GG-NER
Drugs
Uridine
Uridine monophosphate
Citric acid
Diseases
GWAS
Malaria (
31844061
)
Systolic blood pressure response to hydrochlorothiazide in hypertension (
27802415
)
Interacting Genes
16 interacting genes:
APP
CLNS1A
LSM1
LSM2
LSM3
LSM5
LSM7
LSM8
MCRS1
PATL1
POLD2
SDCBP
SMN1
SNRPD2
SNRPF
TARDBP
126 interacting genes:
AGGF1
AXIN2
BACH2
BEND3
BHLHA9
BHLHE40
BLM
BRD8
BRMS1
BRMS1L
C18orf25
C2CD6
C7orf57
C8orf34
CARD9
CAVIN2
CBY2
CCDC13
CCDC136
CCDC85B
CCHCR1
CCNH
CDCA7L
CEP44
CEP70
CNTROB
COIL
CREB3L3
CSRNP1
CYSRT1
CYTIP
DAXX
DRAP1
DVL2
EGR2
ERF
EVI5
FAM9A
FNDC8
FSD2
FXR1
FXR2
GAS7
GCC1
GEM
GIGYF1
GOLGA2
GPBP1
HMBOX1
HOOK2
IKZF1
IKZF3
IKZF4
INO80E
INSYN1
JAKMIP1
KANK2
KAT7
KDM1A
KIAA1958
KRT35
KRTAP10-7
KRTAP2-3
KRTAP2-4
KXD1
LIG4
LSM6
LZTS1
MAGEA11
MAGEA6
MAPK9
MED4
MEOX1
MFAP1
MIER2
MIER3
NAA10
NAB2
NKAPD1
NOP2
OSBPL3
PBK
PBX2
PCM1
PHC2
PIBF1
PINX1
PKNOX2
PPP1R13B
PRMT5
PSTPIP1
PTEN
RABEP1
RALYL
RARA
RETREG3
RIPPLY3
SH2B2
SNAPC5
SP4
SRRM4
SSMEM1
SUV39H1
TADA2B
TBC1D1
TERT
TFAP4
TLE5
TNIP1
TNNI1
TP63
TRIM37
TRIM41
TSPYL2
UPF3B
USHBP1
WASHC3
WBP11
XIAP
ZBTB22
ZCCHC10
ZCCHC12
ZNF23
ZNF639
ZNF8
ZRANB1
Entrez ID
11157
10445
HPRD ID
06286
11298
Ensembl ID
ENSG00000164167
ENSG00000187778
Uniprot IDs
P62312
A0A024R134
Q96EZ8
PDB IDs
3JCR
5O9Z
6AH0
6AHD
6QW6
6QX9
Enriched GO Terms of Interacting Partners
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Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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