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TFCP2 and LSM1
Data Source:
BioGRID
(two hybrid)
TFCP2
LSM1
Description
transcription factor CP2
LSM1 homolog, mRNA degradation associated
Image
No pdb structure
No pdb structure
GO Annotations
Cellular Component
Chromatin
Nucleus
Nucleoplasm
Cytosol
Protein-containing Complex
P-body
Nucleus
Cytoplasm
Cytosol
Axon
Dendrite
Neuronal Cell Body
Messenger Ribonucleoprotein Complex
Lsm1-7-Pat1 Complex
Molecular Function
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
DNA Binding
DNA-binding Transcription Factor Activity
Protein Binding
Transcription Factor Binding
Sequence-specific Double-stranded DNA Binding
RNA Cap Binding
RNA Binding
MRNA Binding
Protein Binding
Pre-mRNA Binding
Biological Process
Regulation Of Transcription By RNA Polymerase II
MRNA Transcription By RNA Polymerase II
Positive Regulation Of Transcription By RNA Polymerase II
Deadenylation-dependent Decapping Of Nuclear-transcribed MRNA
RNA Splicing, Via Transesterification Reactions
MRNA Processing
RNA Splicing
RNA Metabolic Process
Stem Cell Population Maintenance
Exonucleolytic Catabolism Of Deadenylated MRNA
Negative Regulation Of Neuron Differentiation
Histone MRNA Catabolic Process
Pathways
mRNA decay by 5' to 3' exoribonuclease
mRNA decay by 5' to 3' exoribonuclease
Drugs
Diseases
GWAS
Autism spectrum disorder or schizophrenia (
28540026
)
Schizophrenia (
28991256
22037555
29483656
)
Interacting Genes
74 interacting genes:
ACAA1
ADPRH
APBB1
ASAP3
BAG6
C19orf73
CA1
CAPN3
CASP8
CBX8
CDC73
COIL
DNAJC27
DNAJC5B
DPH1
E2F8
EAF1
EIF5B
EPHA10
FAM120C
FANCL
FARS2
FBXL18
GPANK1
HAPLN2
HDAC1
HDAC2
IRAK1BP1
LDB3
LSM1
MAPK1
MAPK14
MAPK8
MOB3C
MORF4L1
MRPL11
MRPL40
MVP
NABP1
NEDD9
NFE4
NHSL2
NOM1
NPEPL1
PHF1
PHF21B
PIMREG
PITPNM1
PLCB1
POLL
POLR3GL
PPIG
PPP1R1B
PPP3R2
PSMD5
RBMS1
RNF2
RXRB
SDCBP
SHTN1
SIN3A
STMN2
SUMO1
TCEA2
TDRD1
TLK1
TRAPPC12
TSPAN12
UBE2I
UBP1
YJU2
YY1
ZCCHC10
ZCCHC12
32 interacting genes:
AGR2
AGR3
BEX5
CLIC1
DAPL1
EXOSC6
EXOSC8
GLUD1
GRHPR
GSTA4
HSP90AA1
LSM2
LSM3
LSM5
LSM6
LSM7
MCCD1
MPDU1
N4BP1
NARS1
NDUFAF3
PSMB5
PSMB8
PTPRC
RRP1B
SMN1
TCL1B
TFCP2
TMEM214
UPF2
UXT
VPS11
Entrez ID
7024
27257
HPRD ID
01790
06281
Ensembl ID
ENSG00000135457
ENSG00000175324
Uniprot IDs
A0A024R120
Q12800
A0A0S2Z590
O15116
PDB IDs
Enriched GO Terms of Interacting Partners
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Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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