Wiki-MPM
About
Search
Browse
People
Funding
Updates
Search
SMN1 and KDM1A
Data Source:
BioGRID
(two hybrid)
SMN1
KDM1A
Description
survival of motor neuron 1, telomeric
lysine demethylase 1A
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Cajal Body
Nuclear Body
Z Disc
Axon
SMN Complex
SMN-Sm Protein Complex
Cytoplasmic Ribonucleoprotein Granule
Neuron Projection
Perikaryon
Gemini Of Coiled Bodies
Chromosome, Telomeric Region
Chromatin
Nucleus
Nucleoplasm
Transcription Regulator Complex
Protein-containing Complex
DNA Repair Complex
Molecular Function
RNA Binding
Protein Binding
Identical Protein Binding
RNA Polymerase II Transcription Factor Binding
P53 Binding
Chromatin Binding
Protein Binding
Transcription Factor Binding
Oxidoreductase Activity
Enzyme Binding
Nuclear Receptor Coactivator Activity
Demethylase Activity
Histone Demethylase Activity
Histone Demethylase Activity (H3-K4 Specific)
Histone Demethylase Activity (H3-K9 Specific)
Histone Demethylase Activity (H3-dimethyl-K4 Specific)
Telomeric DNA Binding
MRF Binding
Flavin Adenine Dinucleotide Binding
Androgen Receptor Binding
Telomeric Repeat-containing RNA Binding
Promoter-specific Chromatin Binding
Biological Process
Spliceosomal Complex Assembly
Spliceosomal SnRNP Assembly
DNA-templated Transcription, Termination
Nervous System Development
Import Into Nucleus
Negative Regulation Of Transcription By RNA Polymerase II
Alternative MRNA Splicing, Via Spliceosome
Positive Regulation Of Neuroblast Proliferation
Regulation Of Transcription By RNA Polymerase II
Protein Demethylation
Blood Coagulation
Regulation Of Double-strand Break Repair Via Homologous Recombination
Positive Regulation Of Neuron Projection Development
Cerebral Cortex Development
Negative Regulation Of Protein Binding
Histone H3-K9 Demethylation
Positive Regulation Of Histone Ubiquitination
Cellular Response To UV
Histone H3-K4 Demethylation
Positive Regulation Of Chromatin Binding
Neuron Maturation
Negative Regulation Of DNA Binding
Negative Regulation Of DNA-binding Transcription Factor Activity
Negative Regulation Of DNA Damage Response, Signal Transduction By P53 Class Mediator
Positive Regulation Of Cell Size
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription By RNA Polymerase II
Guanine Metabolic Process
Positive Regulation Of DNA-binding Transcription Factor Activity
Negative Regulation Of Histone H3-K4 Methylation
Negative Regulation Of Histone H3-K9 Methylation
Muscle Cell Development
Response To Fungicide
Cellular Response To CAMP
Cellular Response To Gamma Radiation
Positive Regulation Of Cold-induced Thermogenesis
Negative Regulation Of Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage By P53 Class Mediator
Regulation Of Cellular Protein Localization
Positive Regulation Of Neural Precursor Cell Proliferation
Positive Regulation Of Stem Cell Proliferation
Pathways
snRNP Assembly
HDACs deacetylate histones
HDMs demethylate histones
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
Regulation of PTEN gene transcription
Estrogen-dependent gene expression
NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux
Potential therapeutics for SARS
Factors involved in megakaryocyte development and platelet production
Drugs
Nusinersen
Diseases
Spinal muscular atrophy (SMA), including: SMA type I (SMA1) / Werdning-Hoffman disease; SMA type II (SMA2); SMA type III (SMA3) / Kugeleberg-Welander disease; SMA type IV (SMA4); X-linked SMA 2 (SMAX2); X-linked distal SMA 3 (DSMAX); Distal SMA autosomal recessive type 4 (DSMA4); Congenital distal spinal muscular atrophy (SMAL); SMA proximal adult autosomal dominant (SMAPAD)
GWAS
Brain morphology (min-P) (
32665545
)
Brain morphology (MOSTest) (
32665545
)
Cortical surface area (min-P) (
32665545
)
Cortical surface area (MOSTest) (
32665545
)
Cortical thickness (min-P) (
32665545
)
Cortical thickness (MOSTest) (
32665545
)
Gamma glutamyl transferase levels (
29403010
)
Global electrical heterogeneity phenotypes (
29622589
)
Pulse pressure (
27841878
)
Subcortical volume (min-P) (
32665545
)
Subcortical volume (MOSTest) (
32665545
)
Interacting Genes
165 interacting genes:
A1BG
A2M
ACTB
ACTL6B
ADAMTS10
AGAP1
ANXA2
APLP1
ARFGAP1
ATP5F1B
ATP6V1A
BAG6
BCL2
BLOC1S6
BYSL
C9orf72
CARHSP1
CCDC90B
CENPB
CHTOP
COIL
COL4A2
COL4A5
COPS6
CPNE6
CRIP2
CSAD
DDAH2
DDX20
DHX9
DMPK
DOCK7
DUS2
DYNC1I1
EEF1A1
EEF1A2
EHHADH
EIF3G
EXT2
EZH2
FAM20C
FAM9B
FBL
FGB
FLAD1
FNDC11
FUBP1
GAPDH
GAR1
GDF9
GEMIN2
GEMIN5
GEMIN7
H3-4
HADHB
HMGXB3
HNRNPR
HNRNPU
HNRNPUL1
IGHM
ILF3
IMMT
INPP5K
IQUB
ITCH
JADE1
KDM1A
KIF5A
KLHL5
KMT2B
KPNB1
KRTAP19-6
KRTAP19-7
KRTAP21-2
KRTAP6-1
KRTAP6-2
LENG8
LRIF1
LSM1
LSM10
LSM11
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MAGED1
MAST2
MED31
MKI67
MPP1
MRPL37
MSH2
NGFR
NKIRAS2
NMT2
NRN1
NTAQ1
OSTF1
PDE4DIP
PKM
PLXNA3
POLR1C
POLR2A
POP7
PPIG
PSME1
QARS1
RBBP4
RBBP6
RBFOX2
RBM48
REX1BD
RN7SL1
RNU1-1
RNU11
RNU2-1
RNU4-1
RPL13
RPS2
RXRA
SCARNA1
SDF4
SELENOW
SEMA5B
SETDB1
SMC5
SMN2
SNORA81
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNU13
SNUPN
SP110
SPANXN2
STRAP
STXBP2
STXBP3
SULT1A3
SUMO3
SYNCRIP
TAF1C
TERC
TIAL1
TLE1
TMSB4X
TP53
TRMT2A
TUBA1A
TUBB3
UCHL1
UNC119
USP4
VPS28
WDR18
WDR73
WIZ
ZBTB16
ZNF431
ZRANB2
ZXDC
265 interacting genes:
AKAP9
ANKEF1
ANKRD23
AP1G2
AR
ARHGAP15
ARHGAP29
ASB10
ASB3
ASCC2
ATP5MF
ATP6V1B1
BAHD1
BAIAP2
BATF
BCAT1
BIRC2
BLZF1
BMP3
BRCA1
C18orf54
C4orf17
C8orf48
C8orf74
CAGE1
CARD10
CCDC121
CCDC14
CCDC172
CCDC33
CCDC74A
CCDC74B
CCDC90B
CDC23
CDC5L
CDCA4
CDCA5
CENPQ
CEP162
CEP57
CEP70
CEP76
CFAP100
COIL
CRBN
CRLF3
CSNK2A1
CSNK2A2
CTBP1
DBF4B
DNAAF4
DNAJA3
DNTTIP1
E2F1
ECI2
ELOF1
EXOC1
EXOC7
FAM161A
FAM204A
FAM9A
FIGNL1
FYCO1
FYN
GABPB2
GAS8
GATA3
GCC1
GDF9
GLYR1
GOLGA2
GOLGA6A
GPATCH2L
GSK3B
GSTCD
GTPBP2
H3-4
H3-5
H3C1
H3C14
HAUS1
HAUS3
HAUS6
HDAC1
HESX1
HOMER3
HOXA1
ID2
IFI35
IGFBP4
IK
IKBIP
IL16
IMMT
INSM1
INTS2
ISL1
ITGB3BP
ITSN2
JRK
KANSL1
KASH5
KDM5B
KIAA0408
KIFC3
KLC3
KLF3
KLHDC4
KRT15
KRT17
KRT19
KRT222
KRT31
KRT33B
KRT35
KRT38
KRT39
KRT40
KRT6A
KRT6B
KRT7
L3MBTL3
LENG8
LINC02875
LOXL4
LZTS1
MALT1
MBD3
MBD4
MCPH1
MCRS1
METTL27
MLC1
MNS1
MTA3
MTF2
MTMR9
MTO1
MYC
MYLIP
NBPF15
NBPF26
NDUFA8
NDUFS1
NECAB2
NEFL
NF2
NFE2L2
NMI
NOSTRIN
NR1H2
NR1H3
NR2C2
NR2E1
NRBF2
ODAD3
OFCC1
OIP5
OPA3
OTUB1
PBX4
PDCD5
PDE4DIP
PEX7
PFDN5
PHC2
PHF19
PHF20L1
PHF21A
PMF1
PNKP
PPARD
PPM1D
PPP1R12A
PRDM1
PRIM2
PSMC1
PSMC3
PTEN
RASSF1
RASSF2
RASSF3
RASSF8
RCOR1
RCOR3
RIOK1
RNF10
RNF168
RPRD1A
SAMD3
SEPTIN6
SERGEF
SETDB1
SF3B2
SH3GLB2
SLU7
SMAD9
SMARCD1
SMN1
SNF8
SNX15
SOCS6
SPATA22
SPATA24
SPICE1
SPRY2
SPSB1
SPZ1
SRGAP3
SSX2IP
STAT3
STX11
STX19
SUMO2
SUV39H1
TACC1
TADA3
TAL1
TDO2
TEDC2
TERF1
TEX35
TEX9
TFIP11
TLE5
TMEM266
TNFAIP1
TNNT2
TP53
TP53BP1
TP53BP2
TRAF4
TRIM39
TRIM54
TSACC
TSC1
TTC23
TTC33
UBA3
UBASH3B
UBE2I
UCHL5
UNC119
UNKL
USP28
USP7
VPS11
VPS37A
VPS37B
WASHC3
WDR83
ZBED1
ZBTB24
ZBTB39
ZCCHC17
ZFP28
ZNF280A
ZNF333
ZNF436
ZNF451
ZNF480
ZNF581
ZNF641
ZNF71
ZNF829
Entrez ID
6606
23028
HPRD ID
02646
09800
Ensembl ID
ENSG00000172062
ENSG00000004487
Uniprot IDs
B4DP61
E7EQZ4
Q16637
O60341
PDB IDs
1G5V
1MHN
2LEH
4A4E
4A4G
4GLI
4QQ6
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
2COM
2DW4
2EJR
2H94
2HKO
2IW5
2L3D
2UXN
2UXX
2V1D
2X0L
2XAF
2XAG
2XAH
2XAJ
2XAQ
2XAS
2Y48
2Z3Y
2Z5U
3ABT
3ABU
3ZMS
3ZMT
3ZMU
3ZMV
3ZMZ
3ZN0
3ZN1
4BAY
4CZZ
4KUM
4UV8
4UV9
4UVA
4UVB
4UVC
4UXN
4XBF
5AFW
5H6Q
5H6R
5IT3
5L3B
5L3C
5L3D
5L3E
5L3F
5L3G
5LBQ
5LGN
5LGT
5LGU
5LHG
5LHH
5LHI
5X60
5YJB
6E1F
6K3E
6KGK
6KGL
6KGM
6KGN
6KGO
6KGP
6KGQ
6KGR
6NQM
6NQU
6NR5
6S35
6TE1
6VYP
6W4K
7JJL
7JJM
7JK7
Enriched GO Terms of Interacting Partners
?
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?