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SMN1 and COIL
Data Source:
BioGRID
(biochemical)
HPRD
(in vitro, in vivo)
SMN1
COIL
Description
survival of motor neuron 1, telomeric
coilin
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Cajal Body
Nuclear Body
Z Disc
Axon
SMN Complex
SMN-Sm Protein Complex
Cytoplasmic Ribonucleoprotein Granule
Neuron Projection
Perikaryon
Gemini Of Coiled Bodies
Fibrillar Center
Nucleus
Nucleoplasm
Nucleolus
Cajal Body
Membrane
Nuclear Body
Molecular Function
RNA Binding
Protein Binding
Identical Protein Binding
Protein Binding
Protein C-terminus Binding
U1 SnRNA Binding
U2 SnRNA Binding
Identical Protein Binding
Biological Process
Spliceosomal Complex Assembly
Spliceosomal SnRNP Assembly
DNA-templated Transcription, Termination
Nervous System Development
Import Into Nucleus
Spliceosomal SnRNP Assembly
Pathways
snRNP Assembly
Drugs
Nusinersen
Diseases
Spinal muscular atrophy (SMA), including: SMA type I (SMA1) / Werdning-Hoffman disease; SMA type II (SMA2); SMA type III (SMA3) / Kugeleberg-Welander disease; SMA type IV (SMA4); X-linked SMA 2 (SMAX2); X-linked distal SMA 3 (DSMAX); Distal SMA autosomal recessive type 4 (DSMA4); Congenital distal spinal muscular atrophy (SMAL); SMA proximal adult autosomal dominant (SMAPAD)
GWAS
Height (
18391951
)
Interacting Genes
165 interacting genes:
A1BG
A2M
ACTB
ACTL6B
ADAMTS10
AGAP1
ANXA2
APLP1
ARFGAP1
ATP5F1B
ATP6V1A
BAG6
BCL2
BLOC1S6
BYSL
C9orf72
CARHSP1
CCDC90B
CENPB
CHTOP
COIL
COL4A2
COL4A5
COPS6
CPNE6
CRIP2
CSAD
DDAH2
DDX20
DHX9
DMPK
DOCK7
DUS2
DYNC1I1
EEF1A1
EEF1A2
EHHADH
EIF3G
EXT2
EZH2
FAM20C
FAM9B
FBL
FGB
FLAD1
FNDC11
FUBP1
GAPDH
GAR1
GDF9
GEMIN2
GEMIN5
GEMIN7
H3-4
HADHB
HMGXB3
HNRNPR
HNRNPU
HNRNPUL1
IGHM
ILF3
IMMT
INPP5K
IQUB
ITCH
JADE1
KDM1A
KIF5A
KLHL5
KMT2B
KPNB1
KRTAP19-6
KRTAP19-7
KRTAP21-2
KRTAP6-1
KRTAP6-2
LENG8
LRIF1
LSM1
LSM10
LSM11
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MAGED1
MAST2
MED31
MKI67
MPP1
MRPL37
MSH2
NGFR
NKIRAS2
NMT2
NRN1
NTAQ1
OSTF1
PDE4DIP
PKM
PLXNA3
POLR1C
POLR2A
POP7
PPIG
PSME1
QARS1
RBBP4
RBBP6
RBFOX2
RBM48
REX1BD
RN7SL1
RNU1-1
RNU11
RNU2-1
RNU4-1
RPL13
RPS2
RXRA
SCARNA1
SDF4
SELENOW
SEMA5B
SETDB1
SMC5
SMN2
SNORA81
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNU13
SNUPN
SP110
SPANXN2
STRAP
STXBP2
STXBP3
SULT1A3
SUMO3
SYNCRIP
TAF1C
TERC
TIAL1
TLE1
TMSB4X
TP53
TRMT2A
TUBA1A
TUBB3
UCHL1
UNC119
USP4
VPS28
WDR18
WDR73
WIZ
ZBTB16
ZNF431
ZRANB2
ZXDC
83 interacting genes:
ACTN1
ACTN2
ACTN4
ADAMTS12
APP
ARMCX1
ATXN1
ATXN1L
BYSL
C1QBP
C9orf72
CCDC136
CCDC159
CCDC57
CCNE1
CDC23
CDK2
CEP70
CEP76
CSNK2B
CYB5R2
DHX16
DNAJA3
DRG1
DYNC2I2
ELOA2
FGF12
FHL5
FXR2
GCC1
HSF2BP
KALRN
KAZN
KDM1A
KLC2
KLC4
KLHL42
KLHL8
KPNA3
LNX1
MAD1L1
MCRS1
MFAP1
MYO15B
MYO5B
NFU1
NIF3L1
NKAPD1
NOLC1
NTAQ1
NUDT18
PDE4D
PDLIM5
PIAS4
PICK1
PLEKHG4
PLOD3
POLR2L
POLR3C
PREPL
PRMT1
PRMT8
PSMA1
PSME3
PTS
SART3
SCYL1
SMN1
SNRPB
SNRPF
SNX6
SPANXN2
SRPK2
TAF9
TCAF1
TFCP2
TGS1
TSPYL2
XRCC5
XRCC6
ZBTB25
ZCCHC10
ZNF277
Entrez ID
6606
8161
HPRD ID
02646
02605
Ensembl ID
ENSG00000172062
ENSG00000121058
Uniprot IDs
B4DP61
E7EQZ4
Q16637
P38432
PDB IDs
1G5V
1MHN
2LEH
4A4E
4A4G
4GLI
4QQ6
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
Enriched GO Terms of Interacting Partners
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Tagcloud (Difference)
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Tagcloud (Intersection)
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