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XRN1 and POLD2
Data Source:
BioGRID
(two hybrid)
XRN1
POLD2
Description
5'-3' exoribonuclease 1
DNA polymerase delta 2, accessory subunit
Image
No pdb structure
GO Annotations
Cellular Component
P-body
Nucleus
Cytosol
Plasma Membrane
Membrane
Dendrite
Neuronal Cell Body
Synapse
Nucleus
Nucleoplasm
Zeta DNA Polymerase Complex
DNA Polymerase Complex
Delta DNA Polymerase Complex
Molecular Function
G-quadruplex RNA Binding
RNA Binding
5'-3' Exoribonuclease Activity
Protein Binding
G-quadruplex DNA Binding
Telomerase RNA Binding
DNA Binding
Protein Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process
RRNA Catabolic Process
Negative Regulation Of Translation
Negative Regulation Of Telomere Maintenance Via Telomerase
Response To Testosterone
Regulation Of MRNA Stability
Nuclear MRNA Surveillance
Histone MRNA Catabolic Process
Cellular Response To Cycloheximide
RNA Phosphodiester Bond Hydrolysis, Exonucleolytic
Cellular Response To Puromycin
Telomere Maintenance
DNA Replication
DNA Strand Elongation Involved In DNA Replication
Transcription-coupled Nucleotide-excision Repair
Nucleotide-excision Repair, DNA Incision, 5'-to Lesion
Nucleotide-excision Repair, DNA Gap Filling
Mismatch Repair
Translesion Synthesis
Telomere Maintenance Via Semi-conservative Replication
Nucleotide-excision Repair, DNA Incision
DNA Damage Response, Detection Of DNA Damage
DNA Biosynthetic Process
Pathways
mRNA decay by 5' to 3' exoribonuclease
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA
Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA
Recognition of DNA damage by PCNA-containing replication complex
Polymerase switching on the C-strand of the telomere
Processive synthesis on the C-strand of the telomere
Telomere C-strand (Lagging Strand) Synthesis
Removal of the Flap Intermediate from the C-strand
Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)
Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
PCNA-Dependent Long Patch Base Excision Repair
Termination of translesion DNA synthesis
HDR through Homologous Recombination (HRR)
Gap-filling DNA repair synthesis and ligation in GG-NER
Dual Incision in GG-NER
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Polymerase switching
Removal of the Flap Intermediate
Processive synthesis on the lagging strand
Drugs
Diseases
GWAS
Benign childhood epilepsy with centro-temporal spikes (
32580138
)
Birth weight (
31043758
)
Heel bone mineral density (
30598549
)
Mean spheric corpuscular volume (
32888494
)
Mosquito bite size (
28199695
)
Waist-hip ratio (
28552196
)
Interacting Genes
66 interacting genes:
ADGRE5
ALDOA
ANGPTL6
AP1G2
ATP5MC2
B3GALT6
BAG6
C1GALT1
CBX5
CCT5
CENPBD1
CHD4
CTSB
CTSH
DCP1B
DNASE2
DPP7
DXO
EXOSC1
EXOSC10
EXOSC6
EXOSC8
FADS1
FBXO7
GLMP
HEATR1
HERC2P4
HNRNPA1
KATNB1
LDHA
LEPR
LGALS3BP
LINC01541
LSM4
MAN2C1
MFSD5
MIR34C
MIR429
MIR7-1
MTCH2
MTREX
NDUFA13
NDUFB10
NDUFB9
PABPC4
PLEKHG2
POLD2
PPP2CA
PRADC1
PSMB5
RBMX
RNF187
SDHB
SKIV2L
SMARCD2
SNHG1
SPATA20
SRRM2
STAM2
TMEM50A
UPF1
UPF2
UPF3B
VWA5B2
WAPL
ZFP36
18 interacting genes:
CCHCR1
CDK2
CDKN1A
EP300
ERBB2
KCTD13
LSM6
PCNA
POLD1
POLD3
POLD4
POLDIP2
POLDIP3
POLH
SOX12
WRN
WRNIP1
XRN1
Entrez ID
54464
5425
HPRD ID
10470
15982
Ensembl ID
ENSG00000114127
ENSG00000106628
Uniprot IDs
Q8IZH2
A0A087WWF6
P49005
PDB IDs
3E0J
6S1M
6S1N
6S1O
6TNY
6TNZ
Enriched GO Terms of Interacting Partners
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Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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