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XRN1 and MIR7-1
Data Source:
BioGRID
(unspecified method)
XRN1
MIR7-1
Description
5'-3' exoribonuclease 1
microRNA 7-1
Image
No pdb structure
No pdb structure
GO Annotations
Cellular Component
P-body
Nucleus
Cytosol
Plasma Membrane
Membrane
Dendrite
Neuronal Cell Body
Synapse
Molecular Function
G-quadruplex RNA Binding
RNA Binding
5'-3' Exoribonuclease Activity
Protein Binding
G-quadruplex DNA Binding
Telomerase RNA Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process
RRNA Catabolic Process
Negative Regulation Of Translation
Negative Regulation Of Telomere Maintenance Via Telomerase
Response To Testosterone
Regulation Of MRNA Stability
Nuclear MRNA Surveillance
Histone MRNA Catabolic Process
Cellular Response To Cycloheximide
RNA Phosphodiester Bond Hydrolysis, Exonucleolytic
Cellular Response To Puromycin
Gene Silencing By MiRNA
Pathways
mRNA decay by 5' to 3' exoribonuclease
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA
Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA
Drugs
Diseases
GWAS
Benign childhood epilepsy with centro-temporal spikes (
32580138
)
Birth weight (
31043758
)
Heel bone mineral density (
30598549
)
Mean spheric corpuscular volume (
32888494
)
Mosquito bite size (
28199695
)
Waist-hip ratio (
28552196
)
Interacting Genes
66 interacting genes:
ADGRE5
ALDOA
ANGPTL6
AP1G2
ATP5MC2
B3GALT6
BAG6
C1GALT1
CBX5
CCT5
CENPBD1
CHD4
CTSB
CTSH
DCP1B
DNASE2
DPP7
DXO
EXOSC1
EXOSC10
EXOSC6
EXOSC8
FADS1
FBXO7
GLMP
HEATR1
HERC2P4
HNRNPA1
KATNB1
LDHA
LEPR
LGALS3BP
LINC01541
LSM4
MAN2C1
MFSD5
MIR34C
MIR429
MIR7-1
MTCH2
MTREX
NDUFA13
NDUFB10
NDUFB9
PABPC4
PLEKHG2
POLD2
PPP2CA
PRADC1
PSMB5
RBMX
RNF187
SDHB
SKIV2L
SMARCD2
SNHG1
SPATA20
SRRM2
STAM2
TMEM50A
UPF1
UPF2
UPF3B
VWA5B2
WAPL
ZFP36
101 interacting genes:
AIMP1
AIMP2
APOBEC3B
AQR
ATXN2
ATXN2L
C1QBP
CELF1
CELF2
CPSF1
CPSF7
DARS1
DDX1
DDX21
DDX23
DDX3X
DDX3Y
DHX36
DHX37
EIF2AK2
EPRS1
ESRP1
FAM98A
FUS
G3BP2
HNRNPA0
HNRNPA1
HNRNPA2B1
HNRNPA3
HNRNPF
HNRNPH1
HNRNPH2
HNRNPH3
HNRNPK
HNRNPL
HNRNPM
HNRNPR
IARS1
IGF2BP1
IGF2BP2
IGF2BP3
KARS1
KNOP1
LARP7
LARS1
LIN28A
LIN28B
LRPPRC
MARS1
MATR3
MSI2
NOL6
NONO
NUFIP2
PDCD11
PTBP1
PTBP3
PUF60
PUM1
PUM2
PURA
PURB
QARS1
QKI
RARS1
RBFOX2
RBM14
RBM4
RBMS1
RBMS2
RTCA
RTCB
SART3
SF3A1
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SPOUT1
STRBP
SUGP2
SYNCRIP
TAF15
TRA2A
TRA2B
TRIM25
TTC3
U2SURP
UPF1
USP36
UTP20
XRN1
YBX1
YBX2
YBX3
ZC3H7A
ZC3H7B
ZNF106
ZNF346
Entrez ID
54464
407043
HPRD ID
10470
Ensembl ID
ENSG00000114127
ENSG00000284179
Uniprot IDs
Q8IZH2
PDB IDs
Enriched GO Terms of Interacting Partners
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Tagcloud (Intersection)
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