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TRIM27 and HDAC1
Data Source:
HPRD
(in vivo)
TRIM27
HDAC1
Description
tripartite motif containing 27
histone deacetylase 1
Image
No pdb structure
GO Annotations
Cellular Component
Fibrillar Center
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Endosome
Early Endosome
Cytosol
PML Body
Retromer Complex
Nuclear Membrane
Histone Deacetylase Complex
Chromatin
Heterochromatin
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Sin3 Complex
NuRD Complex
Protein-containing Complex
Neuronal Cell Body
Molecular Function
Nucleic Acid Binding
DNA Binding
Transcription Coactivator Activity
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Protein Kinase Binding
Identical Protein Binding
Protein Homodimerization Activity
Metal Ion Binding
Ubiquitin Protein Ligase Activity
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Core Promoter Sequence-specific DNA Binding
Core Promoter Sequence-specific DNA Binding
RNA Polymerase II Transcription Factor Binding
RNA Polymerase II Repressing Transcription Factor Binding
P53 Binding
Transcription Corepressor Activity
Histone Deacetylase Activity
Protein Binding
Transcription Factor Binding
Deacetylase Activity
Enzyme Binding
Nucleosomal DNA Binding
NAD-dependent Histone Deacetylase Activity (H3-K14 Specific)
Protein Deacetylase Activity
Activating Transcription Factor Binding
Krueppel-associated Box Domain Binding
Histone Deacetylase Binding
Protein N-terminus Binding
NF-kappaB Binding
Repressing Transcription Factor Binding
E-box Binding
Promoter-specific Chromatin Binding
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Protein Polyubiquitination
Negative Regulation Of Adaptive Immune Response
Negative Regulation Of Protein Kinase Activity
Spermatogenesis
Regulation Of Gene Expression
Positive Regulation Of Autophagy
Protein Ubiquitination
Interferon-gamma Production
Negative Regulation Of Interleukin-2 Production
Negative Regulation Of Tumor Necrosis Factor Production
Regulation Of Protein Localization
Negative Regulation Of Viral Transcription
Arp2/3 Complex-mediated Actin Nucleation
Retrograde Transport, Endosome To Golgi
Positive Regulation Of I-kappaB Kinase/NF-kappaB Signaling
Innate Immune Response
Negative Regulation Of Gene Expression, Epigenetic
Positive Regulation Of Transcription, DNA-templated
Regulation Of Viral Entry Into Host Cell
Positive Regulation Of DNA-binding Transcription Factor Activity
Positive Regulation Of NF-kappaB Transcription Factor Activity
Protein K63-linked Ubiquitination
Negative Regulation Of Calcium Ion Import
Negative Regulation Of Transcription By RNA Polymerase II
Chromatin Organization
Chromatin Remodeling
DNA Methylation-dependent Heterochromatin Assembly
Regulation Of Transcription By RNA Polymerase II
Protein Deacetylation
Endoderm Development
Blood Coagulation
Positive Regulation Of Cell Population Proliferation
Epidermal Cell Differentiation
Negative Regulation Of Gene Expression
Negative Regulation Of Myotube Differentiation
Histone Deacetylation
Hippocampus Development
Neuron Differentiation
Circadian Regulation Of Gene Expression
Odontogenesis Of Dentin-containing Tooth
Embryonic Digit Morphogenesis
ATP-dependent Chromatin Remodeling
Negative Regulation Of Apoptotic Process
Negative Regulation Of I-kappaB Kinase/NF-kappaB Signaling
Negative Regulation By Host Of Viral Transcription
Regulation Of Megakaryocyte Differentiation
Negative Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription, DNA-templated
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Oligodendrocyte Differentiation
Regulation Of Endopeptidase Activity
Negative Regulation Of Androgen Receptor Signaling Pathway
Hair Follicle Placode Formation
Eyelid Development In Camera-type Eye
Fungiform Papilla Formation
Histone H3 Deacetylation
Histone H4 Deacetylation
Negative Regulation Of Canonical Wnt Signaling Pathway
Regulation Of Amyloid-beta Clearance
Regulation Of Signal Transduction By P53 Class Mediator
Beta-catenin-TCF Complex Assembly
Positive Regulation Of Signaling Receptor Activity
Negative Regulation Of Intrinsic Apoptotic Signaling Pathway
Pathways
SUMOylation of ubiquitinylation proteins
Regulation of PTEN stability and activity
Suppression of apoptosis
Transcription of E2F targets under negative control by DREAM complex
Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1
G0 and Early G1
p75NTR negatively regulates cell cycle via SC1
Formation of the beta-catenin:TCF transactivating complex
NOTCH1 Intracellular Domain Regulates Transcription
Downregulation of SMAD2/3:SMAD4 transcriptional activity
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
Constitutive Signaling by NOTCH1 PEST Domain Mutants
Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants
HDACs deacetylate histones
Notch-HLH transcription pathway
Deactivation of the beta-catenin transactivating complex
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression
NoRC negatively regulates rRNA expression
SUMOylation of chromatin organization proteins
Repression of WNT target genes
Repression of WNT target genes
Regulation of TP53 Activity through Acetylation
G1/S-Specific Transcription
RNA Polymerase I Transcription Initiation
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Regulation of PTEN gene transcription
Regulation of PTEN gene transcription
Estrogen-dependent gene expression
Loss of MECP2 binding ability to 5mC-DNA
Regulation of MECP2 expression and activity
MECP2 regulates neuronal receptors and channels
MECP2 regulates transcription of neuronal ligands
FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes
Potential therapeutics for SARS
Factors involved in megakaryocyte development and platelet production
Drugs
Arsenic trioxide
Zinc
Vorinostat
Belinostat
Pracinostat
Romidepsin
Panobinostat
Fingolimod
Mocetinostat
Abexinostat
Zinc acetate
Zinc chloride
Zinc sulfate, unspecified form
Diseases
GWAS
Alopecia areata (
25608926
)
Asthma (
32296059
31619474
29273806
)
Asthma and major depressive disorder (
31619474
)
Autism spectrum disorder or schizophrenia (
28540026
)
Blood protein levels (
28240269
)
Body size at age 10 (
32376654
)
Brain morphology (MOSTest) (
32665545
)
Childhood and early adolescence aggressive behavior (
26087016
)
Daytime sleep phenotypes (
27126917
)
Estimated glomerular filtration rate in diabetes (
31451708
)
Experiencing mood swings (
29500382
)
Feeling miserable (
29500382
)
Fish- and plant-related diet (
32066663
)
General risk tolerance (MTAG) (
30643258
)
Hand grip strength (
29691431
)
Heel bone mineral density (
30598549
)
Hemoglobin levels (
32327693
)
Lung cancer in ever smokers (
28604730
)
Neurociticism (
29500382
)
Platelet aggregation (
20526338
)
Pre-treatment viral load in HIV-1 infection (
31219150
)
Sarcoidosis (Lofgren's syndrome vs non-Lofgren's syndrome) (
26651848
)
Schizophrenia (
30285260
)
Social communication problems (
24047820
)
Subcortical volume (MOSTest) (
32665545
)
Triglyceride levels (
32203549
)
Interacting Genes
354 interacting genes:
ABCA1
ABCF3
ABHD17A
ACSF3
AEN
AMMECR1
AMOTL2
AP1M1
ARHGEF3
ARHGEF5
ARID5A
ARIH2
ARMC7
ARNT2
ARPIN
ATPAF2
ATXN7
AXIN1
BABAM1
BAG1
BAG3
BAG5
BEGAIN
BEX2
BMI1
BMP7
BYSL
C1orf109
CAPN7
CARD10
CATSPER1
CBX8
CCDC102B
CCDC185
CCDC187
CCDC198
CCDC87
CCDC92
CCHCR1
CDC20B
CDC23
CDC7
CDK18
CDKL3
CFAP206
CHCHD3
CHD4
CHUK
CKS1B
CLK2
CNNM3
COX5B
CPNE2
CPNE7
CREB5
CSRP2
CWF19L2
DBF4B
DCX
DDX6
DGCR6
DMRT3
DNMT1
DTNB
DTNBP1
EHHADH
EID1
EIF3D
EIF3E
EIF4A3
EIF4E
EIF4E2
ENKD1
EPC1
ERCC3
EXOC8
FAM110A
FAM126A
FAM126B
FAM161A
FAM193B
FAM214A
FAM214B
FAM83A
FAM90A1
FANCM
FARS2
FASTKD5
FBF1
FBXL19
FBXW5
FHL3
FNDC11
FOXB1
FOXC2
FXYD6
GADD45GIP1
GAS2L2
GATAD2B
GCC2-AS1
GEM
GFAP
GFI1B
GFM2
GLYCTK
GNE
GNPDA2
GPANK1
GPKOW
GRB14
GRB2
GSE1
GTF2F1
HAPLN2
HAUS1
HCK
HDAC1
HDAC4
HGS
HIP1R
HNRNPLL
HOXB5
HOXB9
HOXC8
HR
IGFN1
IKBKB
IKBKE
IL16
ILF2
ILK
INO80B
INPP5J
IP6K3
IQCE
IQCN
IQUB
JOSD1
KANSL1
KAT14
KAT5
KCTD15
KCTD9
KIF1A
KIF9
KIFC3
KRT3
KRT75
KRT76
LAGE3
LASP1
LENG1
LGALS14
LINC00526
LINGO1
LMNB2
LMO1
LMO4
LNX1
LONRF1
MAD2L2
MAGEA11
MAGED4B
MAGEF1
MAGOHB
MAPKBP1
MAT2B
MBD4
MCM7
MCOLN1
MDM2
MED21
MEMO1
MIA3
MID2
MOS
MRPL40
MSRB1
MTMR6
MVP
MYO15B
NCK2
NCOA1
NDE1
NDEL1
NEBL
NEDD9
NEIL2
NEK6
NELFE
NIF3L1
NME7
NOTCH2NLA
NR1D2
NTAQ1
NUDT21
OAS1
OTUB2
P2RX7
PIAS1
PIAS2
PIAS3
PIAS4
PIBF1
PIMREG
PIN1
PKN1
PLEKHN1
PML
POLE2
POLR1C
POLR3C
POM121
PPID
PPL
PPP1R18
PRAM1
PRKAA1
PRPF18
PRPF31
PRR35
PSMA1
PSMB1
PSMB3
PTPMT1
PTPN23
PUS7L
QARS1
RAB29
RAMAC
RB1
RBM23
RBM41
RBX1
RCOR3
REL
RHPN1
RIBC1
RIN1
RNF213
RNF25
RNF6
RSPH14
RXRB
SCNM1
SDCBP
SH2D4A
SIAH1
SIRPA
SLC15A3
SMARCB1
SMARCD1
SMG9
SNRPA
SNRPB2
SORBS3
SPATA2
SPATC1L
SRSF2
STAMBPL1
STK16
STK25
STK26
SYNGAP1
SYT17
SYT6
TACO1
TBC1D22B
TBK1
TCEA2
TCEANC
TCHP
TEAD4
TEX33
THOC1
TLE5
TMSB4X
TMSB4XP6
TNS4
TP53
TPM3
TPRKB
TRAF4
TRAF5
TRIM11
TRIM21
TRIM23
TRIM29
TRIM31
TRIM32
TRIM42
TRIM43
TRIM50
TRIM55
TRIM9
TSGA10IP
TSHZ3
TTLL10
TUBGCP4
TUFT1
TXNDC9
UBASH3A
UBE2A
UBE2D1
UBE2D2
UBE2D3
UBE2D4
UBE2E1
UBE2E2
UBE2E3
UBE2H
UBE2I
UBE2J1
UBE2K
UBE2L6
UBE2N
UBE2O
UBE2T
UBE2U
UBE2W
UBE2Z
UBL5
UCHL3
UCHL5
UHRF2
USE1
USP2
UTP14C
UTP23
VEZF1
VPS25
VPS28
VPS9D1
WT1-AS
XPA
YJU2
ZBTB16
ZC2HC1C
ZFC3H1
ZFHX3
ZFYVE21
ZGPAT
ZMYND19
ZNF250
ZNF384
ZNF414
ZNF417
ZNF446
ZNF572
ZNF580
ZNF581
ZNF587
ZNF688
ZNF79
189 interacting genes:
APEX1
AR
ARID4A
ATF3
ATRX
BAZ2A
BCL11A
BCL3
BCL6
BCL6B
BCOR
BHLHE40
BRCA1
BRMS1
BRMS1L
BUB1
BUB1B
BUB3
CBFA2T3
CCN5
CDC20
CDH1
CDKN1A
CDYL
CHD1
CHD4
CHFR
CIITA
CREBBP
CREM
CSNK2A1
CSNK2A2
CTBP1
CYTOR
DAXX
DDB2
DDX17
DHX30
DNMT1
DNMT3A
DNMT3B
DNMT3L
EED
EID2
EID2B
ELK1
ENO1
EP300
ERCC6
EZH2
FKBP3
FOXG1
FRA10F
GATA3
GCM1
GPS2
H2AC1
H3-4
H3C1
HBP1
HDAC2
HDAC3
HDAC7
HDAC9
HELLS
HEY2
HIC1
HIF1A
HIF1AN
HNRNPD
HR
HUS1
IKZF1
ING1
IRF5
JDP2
KAT5
KCTD11
KDM1A
KLF1
KLF11
KLF4
KLF5
LCOR
MAD1L1
MAGEA1
MBD2
MBD3
MBD3L2
MBD4
MDM2
MECOM
MECP2
MEN1
MIER1
MORF4L2
MTA1
MXD1
MYOD1
NCOR2
NFE4
NFKB1
NFKBIA
NKX2-5
NKX3-2
NR1D2
NR2E3
NR2F2
NR3C1
NRIP1
NUP98
PARP1
PCNA
PEX14
PHB
PHB2
PHF12
PHF21A
PIAS3
PIAS4
PITX2
PML
PPARD
PPARG
PPP2R1B
PRKACA
PRKG1
PRRG4
PTMA
RAD9A
RAP1A
RARA
RB1
RBBP4
RBBP7
RBL1
RBL2
RBP1
RBPJ
RELA
REPIN1
RFC1
RFC4
RUNX1T1
RUNX3
RUVBL2
SALL1
SAP18
SAP30
SATB1
SATB2
SENP1
SERPINB5
SETDB1
SIN3A
SIN3B
SMAD2
SMAD3
SOX6
SP1
SP3
SPEN
SPI1
STAT2
STAT3
SUDS3
SUMO2
SUV39H1
SYK
TAB2
TAL1
TFCP2
TGIF1
TGIF2
THAP11
TNIP1
TOP2A
TOP2B
TP53
TPD52L1
TRIM27
TXNIP
UBE2I
USP38
USP43
VHL
ZBTB16
ZMYND11
ZNF76
Entrez ID
5987
3065
HPRD ID
15996
03143
Ensembl ID
ENSG00000204713
ENSG00000116478
Uniprot IDs
A0A1U9X8R9
P14373
Q13547
Q6IT96
PDB IDs
1TYI
4BKX
5ICN
6Z2J
6Z2K
Enriched GO Terms of Interacting Partners
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