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YBX1 and HNRNPD
Data Source:
BioGRID
(affinity chromatography technology, pull down)
HPRD
(in vivo, in vitro, two hybrid)
YBX1
HNRNPD
Description
Y-box binding protein 1
heterogeneous nuclear ribonucleoprotein D
Image
GO Annotations
Cellular Component
Extracellular Region
Nucleus
Nucleoplasm
U12-type Spliceosomal Complex
Cytoplasm
Cytosol
Cytoplasmic Stress Granule
Nuclear Membrane
Intracellular Membrane-bounded Organelle
Extracellular Exosome
CRD-mediated MRNA Stability Complex
Histone Pre-mRNA 3'end Processing Complex
Messenger Ribonucleoprotein Complex
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytosol
Synapse
Ribonucleoprotein Complex
Molecular Function
Nucleic Acid Binding
DNA Binding
Double-stranded DNA Binding
RNA Binding
Protein Binding
MiRNA Binding
GTPase Binding
C5-methylcytidine-containing RNA Binding
Sequence-specific Double-stranded DNA Binding
Minor Groove Of Adenine-thymine-rich DNA Binding
Chromatin Binding
RNA Binding
Protein Binding
Transcription Factor Binding
MRNA 3'-UTR AU-rich Region Binding
Telomeric DNA Binding
Histone Deacetylase Binding
Biological Process
MRNA Splicing, Via Spliceosome
Regulation Of Transcription, DNA-templated
Notch Signaling Pathway
Epidermis Development
Regulation Of Gene Expression
Negative Regulation Of Translation
Positive Regulation Of Transcription By RNA Polymerase II
MRNA Stabilization
Embryonic Morphogenesis
RNA Transport
TRNA Transport
Positive Regulation Of Cell Division
CRD-mediated MRNA Stabilization
Protein Localization To Cytoplasmic Stress Granule
MiRNA Transport
Negative Regulation Of Cellular Senescence
MRNA Splicing, Via Spliceosome
Liver Development
Regulation Of Transcription, DNA-templated
RNA Processing
RNA Catabolic Process
Regulation Of Gene Expression
RNA Metabolic Process
Cerebellum Development
Regulation Of Telomere Maintenance
Regulation Of Circadian Rhythm
Regulation Of MRNA Stability
Positive Regulation Of Translation
Positive Regulation Of Transcription, DNA-templated
MRNA Stabilization
Response To Calcium Ion
Response To Electrical Stimulus
3'-UTR-mediated MRNA Destabilization
Cellular Response To Amino Acid Stimulus
Cellular Response To Estradiol Stimulus
Cellular Response To Nitric Oxide
Circadian Regulation Of Translation
Response To Rapamycin
Positive Regulation Of Telomere Capping
Response To Sodium Phosphate
Cellular Response To Putrescine
Positive Regulation Of Telomerase RNA Reverse Transcriptase Activity
Hepatocyte Dedifferentiation
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Noncanonical activation of NOTCH3
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA
Drugs
Artenimol
Diseases
GWAS
Chronotype (
30696823
)
Coronary artery disease (
32469254
33020668
)
Morning person (
30696823
)
Refractive error (
32231278
)
Interacting Genes
116 interacting genes:
ACTA2
AKT1
ANKRD2
APBB1
CALM1
CASP8
CSNK2A1
CTCF
DUX4
FBXO33
FMR1
FUS
GSK3B
H1-2
HABP4
HLA-C
HNRNPD
HNRNPK
IL7R
IREB2
IRF1
JAM2
LCP2
LSM3
MAPK1
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
MYC
MYCN
NFYB
PCBP2
PCNA
PRPF40A
PURA
RBBP6
RPS6KA1
RPS6KA3
SLC6A4
SMAD3
SMU1
SREK1
SRSF9
TFAP2A
TP53
TRAF6
VEGFA
87 interacting genes:
ABCC10
ACTB
ADGRE5
ARF4
B3GAT3
BCL2
BET1L
BRCA1
C1QBP
CAPN1
CD81
CINP
COG7
COL18A1
CSDE1
CTSB
CUTA
DGCR2
DHX30
DMAC1
EEF2
ERG
ESR1
EXOSC4
FBXL15
FLNA
GSK3B
GTF3C3
GTSE1
GUK1
HBZ
HDAC1
HIRA
HMGA1
HNRNPF
HNRNPH3
HSPA4
HSPB1
HSPB2
IGF2BP2
IL7R
IMMP2L
IMMT
ING4
LDHA
LSM5
MAP2K1
MAPK6
MEOX2
MPP1
MTA2
NTMT1
P4HB
PABPC1
PCBP1
PCBP2
PCSK7
PDLIM7
PEX10
PPOX
PRDX3
PRKACA
PTBP2
PYCR1
RALY
RPSA
SAFB
SDF2
SEPTIN9
SF3B4
SFN
SHISA5
SLC27A5
SLC3A2
SNAPC4
SNRPC
SREK1
SUMO4
SYNCRIP
TNPO1
TRN-GTT2-7
TSEN34
UBE2I
UQCRC1
VEGFA
VHL
YBX1
Entrez ID
4904
3184
HPRD ID
01095
03206
Ensembl ID
ENSG00000065978
ENSG00000138668
Uniprot IDs
P67809
A0A024RDB4
A0A024RDF4
A1LU37
Q14103
PDB IDs
1H95
5YTS
5YTT
5YTV
5YTX
6A6L
6KTC
6KUG
6LMR
6LMS
1HD0
1HD1
1IQT
1WTB
1X0F
2Z5N
5IM0
Enriched GO Terms of Interacting Partners
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