RTP5 and APOC1

Data Source:
BioGRID (two hybrid)

		RTP5	APOC1
Description		receptor transporter protein 5 (putative)	apolipoprotein C1
Image		No pdb structure
GO Annotations	Cellular Component	Integral Component Of Membrane	Extracellular Region Endoplasmic Reticulum Very-low-density Lipoprotein Particle High-density Lipoprotein Particle Chylomicron
	Molecular Function	Protein Binding Olfactory Receptor Binding	Phospholipase Inhibitor Activity Fatty Acid Binding Protein Binding Phosphatidylcholine Binding Lipase Inhibitor Activity Phosphatidylcholine-sterol O-acyltransferase Activator Activity
	Biological Process	Detection Of Chemical Stimulus Involved In Sensory Perception Of Bitter Taste Protein Targeting To Membrane Protein Insertion Into Membrane	Lipid Metabolic Process Triglyceride Metabolic Process Positive Regulation Of Cholesterol Esterification Negative Regulation Of Phosphatidylcholine Catabolic Process Negative Regulation Of Very-low-density Lipoprotein Particle Clearance Regulation Of Cholesterol Transport Negative Regulation Of Cholesterol Transport Cholesterol Efflux Phospholipid Efflux Plasma Lipoprotein Particle Remodeling High-density Lipoprotein Particle Remodeling Very-low-density Lipoprotein Particle Assembly Chylomicron Remnant Clearance Very-low-density Lipoprotein Particle Clearance Lipoprotein Metabolic Process Negative Regulation Of Fatty Acid Biosynthetic Process Negative Regulation Of Lipid Metabolic Process Negative Regulation Of Receptor-mediated Endocytosis Negative Regulation Of Lipid Catabolic Process Negative Regulation Of Lipoprotein Lipase Activity
Pathways		Olfactory Signaling Pathway	VLDL assembly VLDL clearance VLDL clearance NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux
Drugs
Diseases
GWAS			Alzheimer's disease ( 22832961 30636644 17998437 24755620) Alzheimer's disease (age of onset) ( 22005931) Alzheimer's disease biomarkers ( 23419831) Alzheimer's disease in hypertension ( 31055733) Alzheimer's disease in hypertension-negative individuals ( 31055733) Alzheimer's disease or HDL levels (pleiotropy) ( 30805717) Apolipoprotein A1 levels ( 32203549) Apolipoprotein B levels ( 32203549) Apolipoprotein Levels ( 23031429) Blood protein levels ( 29875488 28240269) Body fat percentage ( 26833246) Body mass index ( 26426971) Body mass index (age>50) ( 26426971) Body mass index x age interaction ( 26426971) Body mass index x sex x age interaction (4df test) ( 26426971) C-reactive protein ( 19567438) C-reactive protein levels ( 30388399 21300955) C-reactive protein levels or HDL-cholesterol levels (pleiotropy) ( 27286809) C-reactive protein levels or LDL-cholesterol levels (pleiotropy) ( 27286809) C-reactive protein levels or total cholesterol levels (pleiotropy) ( 27286809) C-reactive protein levels or triglyceride levels (pleiotropy) ( 27286809) Carotid intima media thickness ( 21909108) Carotid intima media thickness (maximum) ( 31801372) Carotid intima media thickness (mean) ( 31801372) Cerebral amyloid deposition (PET imaging) ( 26252872 30361487) Cerebral amyloid deposition positivity (PET imaging) ( 26252872) Cerebral cortex AV-45 amyloid PET measurement ( 31755389) Cerebrospinal AB1-42 levels in Alzheimer's disease dementia ( 29274321) Cerebrospinal AB1-42 levels in mild cognitive impairment ( 29274321) Cerebrospinal AB1-42 levels in normal cognition ( 29274321) Cerebrospinal fluid AB1-42 levels ( 28247064 30319691 28641921 29274321) Cerebrospinal fluid p-tau levels ( 29274321) Cerebrospinal fluid p-tau levels in mild cognitive impairment ( 29274321) Cerebrospinal fluid p-Tau181p:AB1-42 ratio ( 30319691) Cerebrospinal fluid t-tau levels ( 28641921 29274321) Cerebrospinal fluid t-tau levels in mild cognitive impairment ( 29274321) Cerebrospinal fluid t-tau:AB1-42 ratio ( 30319691 28641921) Cerebrospinal P-tau181p levels ( 28247064) Cerebrospinal T-tau levels ( 28247064) Cholesterol, total ( 20686565) Cingulate cortical amyloid beta load ( 26421299) Cognitive impairment test score ( 30319691) Coronary artery disease ( 32469254 29212778 26343387 33020668) Coronary artery disease (myocardial infarction, percutaneous transluminal coronary angioplasty, coronary artery bypass grafting, angina or chromic ischemic heart disease) ( 28714975) Fish- and plant-related diet ( 32066663) Fruit consumption ( 32066663) HDL cholesterol ( 20686565) HDL cholesterol levels ( 32203549 28334899) HDL cholesterol levels x long total sleep time interaction (2df test) ( 31719535) HDL cholesterol levels x short total sleep time interaction (2df test) ( 31719535) High density lipoprotein cholesterol levels ( 30718733) High light scatter reticulocyte count ( 32888494) High light scatter reticulocyte percentage of red cells ( 32888494) Hippocampal atrophy rate ( 31760383) Hippocampal volume ( 29274321) Hippocampal volume in Alzheimer's disease dementia ( 29274321) Ideal cardiovascular health (clinical) ( 27179730) Immature fraction of reticulocytes ( 32888494) Lamb consumption ( 32066663) LDL cholesterol ( 18262040 18802019 18193043 18193044 20864672 26160806 19060906 20686565) LDL cholesterol levels ( 28334899 28371326) LDL cholesterol to HDL cholesterol ratio ( 28046027) Lipid metabolism phenotypes ( 22286219 19936222) Lipid traits ( 24023261) Lipoprotein-associated phospholipase A2 activity and mass ( 22003152 23118302 20442857) Logical memory (delayed recall) ( 29274321) Logical memory (immediate recall) ( 29274321) Longevity ( 21740922) Low density lipoprotein cholesterol levels ( 28548082) Mean corpuscular hemoglobin concentration ( 32888494) Meat-related diet ( 32066663) Mental health study participation (completed survey) ( 31263887) Metabolic syndrome ( 31589552) Myocardial infarction ( 26343387) Parental longevity (combined parental age at death) ( 29227965) Parental longevity (combined parental attained age, Martingale residuals) ( 29227965) Parental longevity (father's attained age) ( 29227965) Parental longevity (mother's attained age) ( 29227965) Platelet distribution width ( 32888494) Plateletcrit ( 27863252) Quantitative traits ( 19197348) Red cell distribution width ( 28957414) Refractive error ( 32231278) Response to fenofibrate (LDL cholesterol levels) ( 27002377) Resting heart rate ( 27798624) Serum metabolite levels ( 31636271) Serum metabolite levels (CMS) ( 31636271) Total cholesterol levels ( 28334899 30275531 28548082) Triglyceride levels ( 32203549 28334899 31217584) Triglycerides ( 23726366 20686565) Type 2 diabetes ( 28869590) Verbal declarative memory ( 25648963)
Interacting Genes		51 interacting genes: ACTN2 ACTN3 AKAP8L APOC1 ASPG BEND5 BPIFA1 CALCOCO2 CARD9 CBY2 CIDEB COG6 DOCK8 EIF3F FGF14 GOLGA2 GOLGA6L9 HNRNPK HSF2BP KIFAP3 KRT27 KRT31 KRT33B KRT34 KRT40 KRT86 KRTAP19-5 KRTAP6-2 LZTS2 MDFI MIPOL1 MIS18A MKRN3 MTUS2 NFKBID PDE4DIP PNMA1 PNMA2 PSMA3 PSMA6 PSTPIP1 RBPMS RINT1 ROPN1 SERTAD3 SP100 SPDL1 TRAF1 TRIM23 TSGA10 USHBP1	30 interacting genes: ACACA ACSF2 APOA1 APOA2 ATP5MJ BCL2L2 CIDEB DBX1 DHRSX FOXD4L3 GSDMA H4C7 HIGD1C LETMD1 MAIP1 MICOS13 MPC2 MTCH2 MTERF3 NFU1 NSG2 RADIL RSAD2 RTP5 SIRPB1 SPG21 SYT16 TEX44 TPRG1 VKORC1
Entrez ID		285093	341
HPRD ID		08159	00131
Ensembl ID		ENSG00000188011	ENSG00000130208
Uniprot IDs		Q14D33	A0A024R0T8 P02654
PDB IDs			1ALE 1ALF 1IOJ 1OPP 6DVU 6DXR 6DZ6 6NF3
Enriched GO Terms of Interacting Partners?
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