SMARCD1 and APOA5

Number of citations of the paper that reports this interaction (PubMedID 21988832)
75

Data Source:
BioGRID (two hybrid)

		SMARCD1	APOA5
Description		SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	apolipoprotein A5
Image		No pdb structure	No pdb structure
GO Annotations	Cellular Component	Nucleoplasm SWI/SNF Complex Intracellular Membrane-bounded Organelle NpBAF Complex NBAF Complex	Extracellular Region Extracellular Space Early Endosome Late Endosome Endoplasmic Reticulum Lumen Golgi Apparatus Very-low-density Lipoprotein Particle Low-density Lipoprotein Particle High-density Lipoprotein Particle Chylomicron
	Molecular Function	Chromatin Binding Transcription Coactivator Activity Signaling Receptor Binding Protein Binding Molecular Adaptor Activity	Phospholipid Binding Enzyme Activator Activity Heparin Binding Lipid Binding Cholesterol Binding Enzyme Binding Phosphatidylcholine Binding Lipase Binding Low-density Lipoprotein Particle Receptor Binding Phosphatidylcholine-sterol O-acyltransferase Activator Activity Lipase Activator Activity Lipoprotein Lipase Activator Activity Lipoprotein Particle Receptor Binding
	Biological Process	Nucleosome Disassembly Chromatin Remodeling Regulation Of Transcription By RNA Polymerase II Nervous System Development Chromatin-mediated Maintenance Of Transcription Cellular Response To Fatty Acid	Triglyceride Metabolic Process Cholesterol Biosynthetic Process Lipid Transport Positive Regulation Of Cholesterol Esterification Positive Regulation Of Triglyceride Catabolic Process Positive Regulation Of Very-low-density Lipoprotein Particle Remodeling Regulation Of Lipid Metabolic Process Triglyceride Catabolic Process Regulation Of Intestinal Cholesterol Absorption Cholesterol Efflux Phospholipid Efflux Very-low-density Lipoprotein Particle Remodeling High-density Lipoprotein Particle Assembly Lipoprotein Metabolic Process Tissue Regeneration Cholesterol Homeostasis Post-translational Protein Modification Cellular Protein Metabolic Process Positive Regulation Of Fatty Acid Biosynthetic Process Phosphatidylcholine Metabolic Process Positive Regulation Of Lipid Biosynthetic Process Positive Regulation Of Receptor-mediated Endocytosis Positive Regulation Of Lipid Catabolic Process Positive Regulation Of Lipoprotein Lipase Activity Acylglycerol Homeostasis Triglyceride Homeostasis
Pathways		RMTs methylate histone arginines RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known	PPARA activates gene expression Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) Post-translational protein phosphorylation Assembly of active LPL and LIPC lipase complexes Chylomicron remodeling
Drugs
Diseases			Hyperlipoproteinemia, type V
GWAS		Body fat distribution (arm fat ratio) ( 30664634) Body fat distribution (leg fat ratio) ( 30664634) Body fat distribution (trunk fat ratio) ( 30664634)	Blood metabolite levels ( 24816252) Blood protein levels ( 30072576 29875488) Cardiovascular risk factors (age interaction) ( 20838585) Carotenoid and tocopherol levels ( 19185284) Cholesterol, total ( 19060911 26780889 20686565) Coronary artery disease ( 29263402 29212778) Coronary artery disease (myocardial infarction, percutaneous transluminal coronary angioplasty, coronary artery bypass grafting, angina or chromic ischemic heart disease) ( 28714975) Coronary heart disease ( 21378990) Delirium ( 29631748) HDL cholesterol ( 28371326 20864672 19060906 21347282 26780889 20686565 26582766 29212154) HDL Cholesterol - Triglycerides (HDLC-TG) ( 21386085) HDL cholesterol levels ( 31694877 28334899) Hematocrit ( 29403010) Hematological and biochemical traits ( 20139978) High density lipoprotein cholesterol levels ( 30718733) Hypertriglyceridemia ( 31910446 27599772 23505323 20657596) LDL cholesterol ( 18179892 20864672 19060911 20686565) LDL cholesterol levels ( 28334899) Lipid metabolism phenotypes ( 22286219) Lipid traits ( 24386095 24023260) Low HDL-cholesterol levels ( 31910446) Mean corpuscular hemoglobin concentration ( 29403010) Mean corpuscular volume ( 29403010) Metabolic syndrome ( 31910446 30382898 21386085 31170924 28371326 29212154) Metabolite levels ( 23823483 22916037) Multiple sclerosis ( 31604244) NHDL cholesterol to HDL cholesterol ratio ( 28046027) Obesity-related traits ( 23251661) Phosphatidylinositol levels ( 31551469) Phospholipid levels (plasma) ( 22359512) Platelet count ( 29403010) Response to Vitamin E supplementation ( 22437554) Serum metabolite levels ( 31636271) Serum metabolite levels (CMS) ( 31636271) Total cholesterol levels ( 28334899 29403010 29615537 30275531) Triacylglyceride levels ( 31551469) Triglyceride levels ( 30718733 28334899 26763881 28371326 29403010 29615537 29212154) Triglyceride to HDL cholesterol ratio ( 28046027) Triglycerides ( 24097068 19074352 29404214 21909109 18193043 18193044 20864672 26160806 19060906 19060911 22171074 20139978 26780889 20686565 26582766) Triglycerides-Blood Pressure (TG-BP) ( 21386085) Vitamin E levels ( 21729881) Waist Circumference - Triglycerides (WC-TG) ( 21386085)
Interacting Genes		50 interacting genes: ANKS1A ANP32B APOA5 AR C4BPA CALCOCO2 CCDC85B CDC5L CDX2 CHFR CHN2 CLNK CORO1A EGFL7 ESR1 FBXO7 FEZ1 FOS FUS GATA1 GCC1 HNRNPC HSPB1 IGKC JUN KDM1A KLF1 KMT5B KRT15 KRT18 LDOC1 MED4 MTNR1B NME1 NONO NR1H4 NR3C1 NUCB2 PAICS PCBD1 PGR PRDX1 PRMT6 RIF1 RPS29 TNIP2 TP53 USHBP1 VPS37B YWHAG	3 interacting genes: FAS RAB5B SMARCD1
Entrez ID		6602	116519
HPRD ID		03438	06966
Ensembl ID		ENSG00000066117	ENSG00000110243
Uniprot IDs		Q96GM5	A0A0B4RUS7 Q6Q788
PDB IDs
Enriched GO Terms of Interacting Partners?
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