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MIR200C and SF3B4
Data Source:
BioGRID
(unspecified method)
MIR200C
SF3B4
Description
microRNA 200c
splicing factor 3b subunit 4
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U12-type Spliceosomal Complex
Nucleolus
U2-type Precatalytic Spliceosome
Molecular Function
MRNA 3'-UTR Binding
MRNA Binding Involved In Posttranscriptional Gene Silencing
RNA Binding
Protein Binding
Splicing Factor Binding
Biological Process
Negative Regulation Of Cytokine Production
Positive Regulation Of Neuron Projection Development
Negative Regulation Of Vascular Endothelial Growth Factor Receptor Signaling Pathway
Response To Endoplasmic Reticulum Stress
Gene Silencing By MiRNA
MiRNA Mediated Inhibition Of Translation
Positive Regulation Of Endothelial Cell Differentiation
Positive Regulation Of Osteoblast Differentiation
Negative Regulation Of Protein Kinase B Signaling
Negative Regulation Of ERK1 And ERK2 Cascade
Negative Regulation Of Cell Migration Involved In Sprouting Angiogenesis
Negative Regulation Of Interleukin-33 Production
Negative Regulation Of Neuron Death
Response To Amyloid-beta
Regulation Of Vascular Endothelial Cell Proliferation
Positive Regulation Of Mesodermal Cell Differentiation
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Positive Regulation Of MRNA Splicing, Via Spliceosome
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Drugs
Diseases
GWAS
Anthropometric traits (
30166351
)
Anthropometric traits (multi-trait analysis) (
30166351
)
Birth length (
25281659
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Height (
20881960
31562340
18391951
)
Infant length (
25281659
)
Waist circumference adjusted for BMI (adjusted for smoking behaviour) (
28443625
)
Waist circumference adjusted for BMI (joint analysis main effects and smoking interaction) (
28443625
)
Waist circumference adjusted for BMI in non-smokers (
28443625
)
Waist circumference adjusted for body mass index (
25673412
)
Interacting Genes
89 interacting genes:
AIMP2
AQR
ATXN2L
C1QBP
CHERP
CPSF1
CRTAP
DARS1
DDX1
DDX21
DDX23
DDX3X
DHX36
DHX37
EDC4
EIF2AK2
ELAC1
EPRS1
ESRP1
FAM98A
FAM98B
FUS
G3BP2
GRSF1
HNRNPA0
HNRNPA1
HNRNPA2B1
HNRNPA3
HNRNPF
HNRNPH1
HNRNPH2
HNRNPH3
HNRNPK
HNRNPL
HNRNPM
HNRNPR
IARS1
IGF2BP1
IGF2BP2
IGF2BP3
KARS1
KNOP1
LARP7
LIN28A
LRPPRC
MARS1
MATR3
MSI2
NOL6
NONO
NUDT16L1
NUFIP2
PDCD11
PTBP1
PTBP3
PTCD3
PUF60
PURA
QARS1
RARS1
RBFOX2
RBM14
RBM4
RTCB
SART3
SF3A1
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SPOUT1
STRBP
SUGP2
SYMPK
SYNCRIP
TAF15
TRA2A
TRA2B
TRIM56
U2SURP
UPF1
UTP20
YBX1
YBX2
YBX3
ZFR
ZNF346
104 interacting genes:
APBB1
BAG3
BAIAP2
BMPR1A
CHERP
CWF19L2
DDX17
DDX42
EFTUD2
EWSR1
FKBP1A
FRK
GRB2
HNRNPD
HNRNPF
HNRNPH1
HNRNPUL1
HSPB7
ILF3
ITSN1
MAPK9
METTL17
MIR1-1
MIR106A
MIR106B
MIR107
MIR10B
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR141
MIR145
MIR155
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18B
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR20B
MIR21
MIR221
MIR222
MIR25
MIR29A
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-3
MIR9-1
MIR92A1
MIR92A2
MIR93
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7G
MIRLET7I
NCK2
NUB1
PPP1R16B
PRPF40A
QARS1
RAMAC
RBM10
RBM39
RBM4
RPP25
SEC24D
SF1
SF3B2
SRSF6
SS18L1
STK19
SUMO4
TCAF1
TCERG1
TFG
TLE5
TRAF4
U2AF2
UBASH3A
WBP4
WDR77
ZCCHC10
ZNF3
ZNF48
Entrez ID
406985
10262
HPRD ID
12028
Ensembl ID
ENSG00000207713
ENSG00000143368
Uniprot IDs
B3KUJ0
Q15427
PDB IDs
1X5T
5GVQ
5Z56
5Z57
5Z58
6AH0
6QX9
6Y53
6Y5Q
Enriched GO Terms of Interacting Partners
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Tagcloud (Difference)
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Tagcloud (Intersection)
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