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SNRPF and COIL
Data Source:
BioGRID
(two hybrid)
SNRPF
COIL
Description
small nuclear ribonucleoprotein polypeptide F
coilin
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U7 SnRNP
U1 SnRNP
U4 SnRNP
U12-type Spliceosomal Complex
Sno(s)RNA-containing Ribonucleoprotein Complex
Cytosol
Small Nuclear Ribonucleoprotein Complex
Methylosome
PICln-Sm Protein Complex
SMN-Sm Protein Complex
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
Fibrillar Center
Nucleus
Nucleoplasm
Nucleolus
Cajal Body
Membrane
Nuclear Body
Molecular Function
RNA Binding
Protein Binding
Protein Binding
Protein C-terminus Binding
U1 SnRNA Binding
U2 SnRNA Binding
Identical Protein Binding
Biological Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Termination Of RNA Polymerase II Transcription
Histone MRNA Metabolic Process
RNA Splicing
Import Into Nucleus
Spliceosomal SnRNP Assembly
Pathways
SLBP independent Processing of Histone Pre-mRNAs
snRNP Assembly
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
RNA Polymerase II Transcription Termination
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
Drugs
Diseases
GWAS
Chronic obstructive pulmonary disease (
30804561
)
Lung function (FEV1/FVC) (
30804560
)
Peak expiratory flow (
30804560
)
Refractive error (
32231278
)
Height (
18391951
)
Interacting Genes
26 interacting genes:
COIL
DDX20
GEMIN2
GEMIN5
GEMIN6
HOMER3
HSPB1
IKZF1
IL7R
LNX1
LSM3
LSM5
LSM6
LSM7
MEOX2
OSBPL2
PSMA3
PUF60
RPL9
SMN2
SNRPD2
SNRPE
SNRPG
SRRT
SRSF5
WDR77
83 interacting genes:
ACTN1
ACTN2
ACTN4
ADAMTS12
APP
ARMCX1
ATXN1
ATXN1L
BYSL
C1QBP
C9orf72
CCDC136
CCDC159
CCDC57
CCNE1
CDC23
CDK2
CEP70
CEP76
CSNK2B
CYB5R2
DHX16
DNAJA3
DRG1
DYNC2I2
ELOA2
FGF12
FHL5
FXR2
GCC1
HSF2BP
KALRN
KAZN
KDM1A
KLC2
KLC4
KLHL42
KLHL8
KPNA3
LNX1
MAD1L1
MCRS1
MFAP1
MYO15B
MYO5B
NFU1
NIF3L1
NKAPD1
NOLC1
NTAQ1
NUDT18
PDE4D
PDLIM5
PIAS4
PICK1
PLEKHG4
PLOD3
POLR2L
POLR3C
PREPL
PRMT1
PRMT8
PSMA1
PSME3
PTS
SART3
SCYL1
SMN1
SNRPB
SNRPF
SNX6
SPANXN2
SRPK2
TAF9
TCAF1
TFCP2
TGS1
TSPYL2
XRCC5
XRCC6
ZBTB25
ZCCHC10
ZNF277
Entrez ID
6636
8161
HPRD ID
04645
02605
Ensembl ID
ENSG00000139343
ENSG00000121058
Uniprot IDs
P62306
P38432
PDB IDs
3CW1
3JCR
3PGW
4F7U
4PJO
4V98
4WZJ
5MQF
5O9Z
5XJC
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
5YZG
5Z56
5Z57
5Z58
6AH0
6FF7
6ICZ
6ID0
6ID1
6QDV
6QW6
6QX9
6V4X
6Y53
6Y5Q
7A5P
Enriched GO Terms of Interacting Partners
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Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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