RAD23B and TDG

Number of citations of the paper that reports this interaction (PMID 12505994)
18

Data Source:
HPRD (two hybrid, in vivo, in vitro)

		RAD23B	TDG
Gene Name		RAD23 homolog B (S. cerevisiae)	thymine-DNA glycosylase
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Gene Ontology Annotations	Cellular Component	Proteasome Complex Nucleus Nucleoplasm Cytoplasm XPC Complex	Nucleus Nucleoplasm Plasma Membrane PML Body
	Molecular Function	Damaged DNA Binding Single-stranded DNA Binding Protein Binding Polyubiquitin Binding	RNA Polymerase II Transcription Cofactor Activity Damaged DNA Binding Double-stranded DNA Binding Protein Kinase C Binding Protein Binding Transcription Factor Binding Pyrimidine-specific Mismatch Base Pair DNA N-glycosylase Activity DNA N-glycosylase Activity Protein Domain Specific Binding Mismatched DNA Binding SUMO Binding Protein Homodimerization Activity Structure-specific DNA Binding
	Biological Process	Nucleotide-excision Repair, DNA Damage Recognition Nucleotide-excision Repair, DNA Damage Removal DNA Repair Nucleotide-excision Repair Spermatogenesis Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process	Negative Regulation Of Transcription From RNA Polymerase II Promoter DNA Repair Base-excision Repair Base-excision Repair, AP Site Formation Mismatch Repair Transcription From RNA Polymerase II Promoter Embryo Development Gene Expression Chromatin Modification Negative Regulation Of Protein Binding Oxidative DNA Demethylation Negative Regulation Of Chromatin Binding Regulation Of Gene Expression, Epigenetic Depyrimidination DNA Demethylation
Pathways		Nucleotide Excision Repair Global Genomic NER (GG-NER) Formation of incision complex in GG-NER DNA Damage Recognition in GG-NER Dual incision reaction in GG-NER	Base Excision Repair TET1,2,3 and TDG demethylate DNA Epigenetic regulation of gene expression Depyrimidination Resolution of AP sites via the multiple-nucleotide patch replacement pathway Cleavage of the damaged pyrimidine Recognition and association of DNA glycosylase with site containing an affected pyrimidine Base-Excision Repair, AP Site Formation Removal of DNA patch containing abasic residue Resolution of AP sites via the single-nucleotide replacement pathway Base-free sugar-phosphate removal via the single-nucleotide replacement pathway Displacement of DNA glycosylase by APE1 Resolution of Abasic Sites (AP sites)
Drugs
Diseases
GWAS		Body mass index ( 20966902) Breast cancer ( 21263130) Prostate cancer ( 23023329)
Protein-Protein Interactions		20 interactors: ADRM1 ATXN3 CALM1 DBI DEAF1 HMGB1 MLH1 MPG NGLY1 PAX3 PNMA5 PSMD4 PUF60 RPA1 TDG UBA2 UBB UBE3A XPC ZFAND5	30 interactors: AR CREBBP DDX39B DNMT3B DTL EP300 ESR1 IKZF1 JUN JUNB NKX2-1 NR3C1 PCNA PGR PML RAD23B RXRA SERBP1 SKIL SMAD4 SNIP1 SUMO1 SUMO2 SUMO3 THRA TP53 TP73 UBE2I VDR XPC
Entrez ID		5887	6996
HPRD ID		06772	03251
Ensembl ID		ENSG00000119318	ENSG00000139372
Uniprot IDs		B7Z4W4 P54727	B4DI29 B4E127 Q13569
PDB IDs		1P1A 1PVE 1UEL	1WYW 2D07 2RBA 3UFJ 3UO7 3UOB 4FNC 4JGC
Enriched GO Terms of Interacting Partners?		Cellular Macromolecule Catabolic Process Catabolic Process Cellular Response To DNA Damage Stimulus DNA Repair DNA Catabolic Process Base-excision Repair DNA Metabolic Process Nitrogen Compound Metabolic Process Aromatic Compound Catabolic Process Cellular Response To Stress Response To Stress Cellular Nitrogen Compound Metabolic Process Protein Catabolic Process Mismatch Repair Cellular Metabolic Process Base-excision Repair, AP Site Formation Modification-dependent Protein Catabolic Process Nucleobase-containing Compound Metabolic Process Regulation Of Protein Ubiquitination Involved In Ubiquitin-dependent Protein Catabolic Process Nucleotide-excision Repair Mitotic DNA Damage Checkpoint Proteolysis Involved In Cellular Protein Catabolic Process Cellular Protein Catabolic Process Mitotic DNA Integrity Checkpoint Multicellular Organismal Development Positive Regulation Of Proteolysis Heterocycle Metabolic Process Deoxyribose Phosphate Catabolic Process Cellular Aromatic Compound Metabolic Process Apoptotic Process Nucleotide-excision Repair, DNA Damage Removal Anatomical Structure Development Programmed Cell Death System Development Cell Death Death Negative Regulation Of Cellular Metabolic Process Regulation Of Proteolysis Response To Abiotic Stimulus Deoxyribonucleotide Catabolic Process DNA Damage Checkpoint Nervous System Development G1/S Transition Of Mitotic Cell Cycle Mitotic Cell Cycle Checkpoint Protein Polyubiquitination Developmental Process Behavioral Fear Response Fear Response Transcription From RNA Polymerase II Promoter Regulation Of Cell Cycle Process	Negative Regulation Of Gene Expression Positive Regulation Of Cellular Metabolic Process Transcription Initiation From RNA Polymerase II Promoter Regulation Of Transcription From RNA Polymerase II Promoter Negative Regulation Of Biosynthetic Process Positive Regulation Of Metabolic Process Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process DNA-templated Transcription, Initiation Nucleobase-containing Compound Metabolic Process Positive Regulation Of Transcription From RNA Polymerase II Promoter Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Positive Regulation Of Gene Expression Transcription From RNA Polymerase II Promoter Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Transcription, DNA-templated Cellular Nitrogen Compound Metabolic Process Negative Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Macromolecule Biosynthetic Process Regulation Of Transcription, DNA-templated Gland Development Response To Organic Substance Regulation Of Gene Expression Regulation Of Nucleic Acid-templated Transcription Nitrogen Compound Metabolic Process Regulation Of RNA Biosynthetic Process Positive Regulation Of Cellular Biosynthetic Process Regulation Of RNA Metabolic Process RNA Metabolic Process Regulation Of Metabolic Process Regulation Of Nitrogen Compound Metabolic Process Cellular Response To Organic Substance Gene Expression Epithelium Development Transcription, DNA-templated Steroid Hormone Mediated Signaling Pathway RNA Biosynthetic Process Tissue Development Negative Regulation Of Cellular Metabolic Process Intracellular Receptor Signaling Pathway Hormone-mediated Signaling Pathway Cellular Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Cellular Metabolic Process Organ Development Regulation Of Cellular Process Cellular Response To Steroid Hormone Stimulus Response To Lipid Response To Abiotic Stimulus
Tagcloud ?		a3 adoptive bioinformatic blunting dige diploid disulfide excision galactosidase hnrnpa3 hnrnpq imr90 isomerase lesser mir mirrored pdia3 permanent perturbation proteome ribonucleoprotein senescence senescent slowed synaptotagmin syncrip untranslated utrs	cytosines deamination dr1 dr5 element glycosylase harboring helix heterodimers initiates mapping methylated mismatch mismatches nucleotides pleiotropic potentiated rar repeat retinoid retinoids rxr screen spaced spontaneous thymine transactivation transfection yeast
Tagcloud (Difference) ?		a3 adoptive bioinformatic blunting dige diploid disulfide excision galactosidase hnrnpa3 hnrnpq imr90 isomerase lesser mir mirrored pdia3 permanent perturbation proteome ribonucleoprotein senescence senescent slowed synaptotagmin syncrip untranslated utrs	cytosines deamination dr1 dr5 element glycosylase harboring helix heterodimers initiates mapping methylated mismatch mismatches nucleotides pleiotropic potentiated rar repeat retinoid retinoids rxr screen spaced spontaneous thymine transactivation transfection yeast
Tagcloud (Intersection) ?