TSPAN1 and KDM4A

Data Source:
BioGRID (proximity labelling technology)

		TSPAN1	KDM4A
Description		tetraspanin 1	lysine demethylase 4A
Image		No pdb structure
GO Annotations	Cellular Component	Nucleoplasm Cytoplasm Lysosomal Membrane Plasma Membrane Integral Component Of Plasma Membrane Membrane Cell Junction Vesicle Intracellular Membrane-bounded Organelle Perinuclear Region Of Cytoplasm Extracellular Exosome	Fibrillar Center Nucleus Nucleoplasm Cytosol
	Molecular Function	Protein Binding	Protein Binding Zinc Ion Binding Ubiquitin Protein Ligase Binding Histone Demethylase Activity Histone Demethylase Activity (H3-K9 Specific) Methylated Histone Binding Histone Demethylase Activity (H3-K36 Specific)
	Biological Process	Protein Stabilization	Chromatin Remodeling Negative Regulation Of Autophagy Negative Regulation Of Gene Expression Viral Process Histone Demethylation Histone H3-K9 Demethylation Negative Regulation Of Transcription, DNA-templated Histone H3-K36 Demethylation
Pathways			HDMs demethylate histones Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux
Drugs
Diseases
GWAS		Body mass index ( 26426971)	anorexia nervosa, attention-deficit/hyperactivity disorder, autism spectrum disorder, bipolar disorder, major depression, obsessive-compulsive disorder, schizophrenia, or Tourette syndrome (pleiotropy) ( 31835028) Autism spectrum disorder or schizophrenia ( 28540026) Household income (MTAG) ( 31844048) Menarche (age at onset) ( 25231870) Number of sexual partners ( 30643258) Perceived intensity of sweet substances ( 31005972) Red blood cell count ( 32888494) Refractive error ( 32231278) Schizophrenia ( 28991256 25056061 29483656) Smoking status (ever vs never smokers) ( 30643258) Squamous cell lung carcinoma ( 28604730)
Interacting Genes		4 interacting genes: MDK NFKBIB TFAM TMEM80	5 interacting genes: H3C1 H4C1 RB1 RNF168 RNF8
Entrez ID		10103	9682
HPRD ID		18232	17168
Ensembl ID		ENSG00000117472	ENSG00000066135
Uniprot IDs		O60635	O75164
PDB IDs			2GF7 2GFA 2GP3 2GP5 2OQ6 2OQ7 2OS2 2OT7 2OX0 2P5B 2PXJ 2Q8C 2Q8D 2Q8E 2QQR 2QQS 2VD7 2WWJ 2YBK 2YBP 2YBS 3NJY 3PDQ 3RVH 3U4S 4AI9 4BIS 4GD4 4URA 4V2V 4V2W 5A7N 5A7O 5A7P 5A7Q 5A7S 5A7W 5A80 5ANQ 5D6W 5D6X 5D6Y 5F2S 5F2W 5F32 5F37 5F39 5F3C 5F3E 5F3G 5F3I 5F5I 5FPV 5FWE 5FY8 5FYC 5FYH 5FYI 5LY1 5LY2 5TVR 5TVS 5VAR 5VGI 5VMP 6CG1 6CG2 6G5W 6G5X 6H4O 6H4P 6H4Q 6H4R 6H4S 6H4T 6H4U 6H4V 6H4W 6H4X 6H4Y 6H8P 6HGT 7D4A
Enriched GO Terms of Interacting Partners?
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