TRAPPC6A and SF3B5

Number of citations of the paper that reports this interaction (PubMedID 32296183)
86

Data Source:
BioGRID (two hybrid)

		TRAPPC6A	SF3B5
Description		trafficking protein particle complex subunit 6A	splicing factor 3b subunit 5
Image
GO Annotations	Cellular Component	Endoplasmic Reticulum Cis-Golgi Network Trans-Golgi Network Cytosol TRAPP Complex	Nucleus Nucleoplasm U2 SnRNP U12-type Spliceosomal Complex U2-type Precatalytic Spliceosome Precatalytic Spliceosome
	Molecular Function	Protein Binding	RNA Binding Protein Binding Splicing Factor Binding
	Biological Process	Endoplasmic Reticulum To Golgi Vesicle-mediated Transport Regulation Of GTPase Activity Melanosome Assembly	MRNA Splicing, Via Spliceosome
Pathways		COPII-mediated vesicle transport RAB GEFs exchange GTP for GDP on RABs	mRNA Splicing - Major Pathway mRNA Splicing - Minor Pathway
Drugs		S-palmitoyl-L-cysteine
Diseases
GWAS		Alanine aminotransferase levels ( 33339817) Alzheimer's disease (onset between ages 58 and 79) ( 30979435) Alzheimer's disease or HDL levels (pleiotropy) ( 30805717) Aspartate aminotransferase levels ( 33339817) Cerebrospinal fluid AB1-42 levels ( 28247064)
Interacting Genes		47 interacting genes: BAG4 CAVIN2 CD2BP2 CRYAB CTDSP1 EFS EYA2 FOXN1 GGA3 GINS3 GOLGA6A GORASP2 HOXA1 HSPB8 IKZF3 INCA1 KANK4 KRTAP13-2 LHX4 MYOZ3 PAX6 PFDN5 PRR22 RAB3IP RAD54B REL RUSC1 SCOC SERTAD3 SF3B5 SMUG1 TAX1BP1 TEPSIN TRAPPC10 TRAPPC12 TRAPPC2 TRAPPC2L TRAPPC3 TRAPPC3L TRAPPC6B TRIM35 TTC23 UBAP2 YPEL3 ZFP90 ZMIZ2 ZNRD2	6 interacting genes: MIR21 MIRLET7G SF3B6 STAMBPL1 TRAPPC6A U2AF2
Entrez ID		79090	83443
HPRD ID		14503	18042
Ensembl ID		ENSG00000007255	ENSG00000169976
Uniprot IDs		B7TZ90 O75865	Q9BWJ5
PDB IDs		2C0J 2J3T	5IFE 5O9Z 5Z56 5Z57 5Z58 5ZYA 6AH0 6EN4 6FF4 6FF7 6QX9 6Y50 6Y5Q 7ABG 7ABH 7ABI
Enriched GO Terms of Interacting Partners?
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