KDM4D and LRRK2

Number of citations of the paper that reports this interaction (PubMedID 29513927)
16

Data Source:
BioGRID (pull down)

		KDM4D	LRRK2
Description		lysine demethylase 4D	leucine rich repeat kinase 2
Image
GO Annotations	Cellular Component	Nucleus Nucleoplasm Pericentric Heterochromatin Site Of Double-strand Break Blood Microparticle	Golgi Membrane Extracellular Space Cytoplasm Mitochondrion Mitochondrial Outer Membrane Mitochondrial Inner Membrane Mitochondrial Matrix Lysosome Endosome Endoplasmic Reticulum Endoplasmic Reticulum Membrane Golgi Apparatus Golgi-associated Vesicle Trans-Golgi Network Cytosol Plasma Membrane Microvillus Inclusion Body Axon Dendrite Growth Cone Synaptic Vesicle Membrane Cytoplasmic Vesicle Mitochondrial Membrane Cytoplasmic Side Of Mitochondrial Outer Membrane Dendrite Cytoplasm Neuron Projection Neuronal Cell Body Terminal Bouton Perikaryon Intracellular Membrane-bounded Organelle Amphisome Autolysosome Membrane Raft Extracellular Exosome Endoplasmic Reticulum Exit Site Multivesicular Body, Internal Vesicle Postsynapse Glutamatergic Synapse Caveola Neck Presynaptic Cytosol Ribonucleoprotein Complex Wnt Signalosome
	Molecular Function	Damaged DNA Binding Protein Binding Chromatin DNA Binding Histone Demethylase Activity Histone H3-methyl-lysine-9 Demethylase Activity Metal Ion Binding Dioxygenase Activity	SNARE Binding Magnesium Ion Binding Actin Binding GTPase Activity Protein Kinase Activity Protein Serine/threonine Kinase Activity MAP Kinase Kinase Kinase Activity Protein Serine/threonine Phosphatase Activity GTPase Activator Activity Protein Binding ATP Binding GTP Binding Microtubule Binding Tubulin Binding Kinase Activity Syntaxin-1 Binding Signaling Receptor Complex Adaptor Activity Clathrin Binding Small GTPase Binding GTP-dependent Protein Kinase Activity Peroxidase Inhibitor Activity Co-receptor Binding Identical Protein Binding Protein Homodimerization Activity Transmembrane Transporter Binding Protein Kinase A Binding Protein Serine Kinase Activity Beta-catenin Destruction Complex Binding
	Biological Process	Double-strand Break Repair Via Homologous Recombination Regulation Of Protein Phosphorylation Chromatin Remodeling Histone H3-K9 Demethylation Positive Regulation Of Chromatin Binding Cellular Response To Ionizing Radiation Negative Regulation Of Histone H3-K9 Trimethylation Positive Regulation Of Double-strand Break Repair Via Nonhomologous End Joining	MAPK Cascade Negative Regulation Of Protein Phosphorylation Positive Regulation Of Protein Phosphorylation Protein Phosphorylation Protein Dephosphorylation Protein Import Into Nucleus Endocytosis Autophagy Response To Oxidative Stress Mitochondrion Organization Endoplasmic Reticulum Organization Golgi Organization Lysosome Organization Signal Transduction JNK Cascade Spermatogenesis Neuromuscular Junction Development Determination Of Adult Lifespan Cellular Response To Starvation Regulation Of Autophagy Positive Regulation Of Autophagy Regulation Of Protein Kinase A Signaling Negative Regulation Of Protein Processing Negative Regulation Of Neuron Projection Development Regulation Of Neuron Maturation Negative Regulation Of Macroautophagy Phosphorylation Peptidyl-serine Phosphorylation Peptidyl-threonine Phosphorylation Calcium-mediated Signaling Striatum Development Olfactory Bulb Development Tangential Migration From The Subventricular Zone To The Olfactory Bulb Positive Regulation Of Protein Ubiquitination Regulation Of Protein Stability Negative Regulation Of Protein Binding Positive Regulation Of Protein Binding Positive Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Positive Regulation Of Tumor Necrosis Factor Production Negative Regulation Of GTPase Activity Cellular Response To Oxidative Stress Cellular Protein Localization Intracellular Signal Transduction Regulation Of Kidney Size Exploration Behavior Locomotory Exploration Behavior Regulation Of Lysosomal Lumen PH Regulation Of Locomotion Regulation Of Membrane Potential Positive Regulation Of Programmed Cell Death Positive Regulation Of MAP Kinase Activity Positive Regulation Of Protein Kinase Activity GTP Metabolic Process Protein Autophosphorylation Intracellular Distribution Of Mitochondria Neuron Projection Morphogenesis Mitochondrion Localization Positive Regulation Of Nitric-oxide Synthase Biosynthetic Process Regulation Of Mitochondrial Depolarization Regulation Of Synaptic Transmission, Glutamatergic Canonical Wnt Signaling Pathway Excitatory Postsynaptic Potential Regulation Of Dopamine Receptor Signaling Pathway Positive Regulation Of Dopamine Receptor Signaling Pathway Regulation Of ER To Golgi Vesicle-mediated Transport Regulation Of Canonical Wnt Signaling Pathway Regulation Of Dendritic Spine Morphogenesis Protein Localization To Mitochondrion Protein Localization To Endoplasmic Reticulum Exit Site Neuron Death Cellular Response To Manganese Ion Cellular Response To Organic Cyclic Compound Reactive Oxygen Species Metabolic Process Regulation Of Mitochondrial Fission Positive Regulation Of Canonical Wnt Signaling Pathway Negative Regulation Of Excitatory Postsynaptic Potential Neuron Projection Arborization Positive Regulation Of Synaptic Vesicle Endocytosis Regulation Of Neuron Death Negative Regulation Of Neuron Death Positive Regulation Of Histone Deacetylase Activity Negative Regulation Of Endoplasmic Reticulum Stress-induced Intrinsic Apoptotic Signaling Pathway Positive Regulation Of Protein Autoubiquitination Regulation Of Neuroblast Proliferation Regulation Of Synaptic Vesicle Transport Negative Regulation Of Late Endosome To Lysosome Transport Negative Regulation Of Autophagosome Assembly Negative Regulation Of Thioredoxin Peroxidase Activity By Peptidyl-threonine Phosphorylation Negative Regulation Of Hydrogen Peroxide-induced Cell Death Negative Regulation Of Protein Targeting To Mitochondrion Negative Regulation Of Protein Processing Involved In Protein Targeting To Mitochondrion Cellular Response To Dopamine Positive Regulation Of Microglial Cell Activation Wnt Signalosome Assembly Regulation Of Retrograde Transport, Endosome To Golgi Regulation Of CAMKK-AMPK Signaling Cascade Regulation Of Branching Morphogenesis Of A Nerve Regulation Of Synaptic Vesicle Exocytosis Negative Regulation Of Peroxidase Activity
Pathways		HDMs demethylate histones	PTK6 promotes HIF1A stabilization
Drugs			Fostamatinib
Diseases
GWAS		Diabetic kidney disease ( 26305897)	Cerebral amyloid deposition in APOEe4 non-carriers (PET imaging) ( 26252872) Chronic inflammatory diseases (ankylosing spondylitis, Crohn's disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy) ( 26974007) Crohn's disease ( 18587394 28067908 21102463) Daytime sleep phenotypes ( 27126917) Inflammatory bowel disease ( 28067908 23128233) Leprosy ( 25642632) Low density lipoprotein cholesterol levels ( 32154731) Mean platelet volume ( 32888494) Obesity-related traits ( 23251661) Parkinson's disease ( 21292315 19915576 25064009 31660654 27182965 24842889 28892059 22438815 28011712 21738487) Parkinson's disease or first degree relation to individual with Parkinson's disease ( 31701892) Pediatric autoimmune diseases ( 26301688) Platelet count ( 32888494) Platelet distribution width ( 32888494) Plateletcrit ( 32888494)
Interacting Genes		4 interacting genes: CEP76 LRRK2 PPP1CC TP53	146 interacting genes: ABLIM1 ACTB AFF4 AHCYL1 AHDC1 AKT1 ANKS4B ANO6 APEX2 APP ARFGAP1 ARHGEF7 AURKB BAG1 BAG2 BAG3 C18orf25 C1orf87 CAMK1D CBLB CCDC43 CDC42EP3 CDKL3 CETN3 CHGB CRMP1 CUEDC1 CXCL11 CYREN DBF4B DDIT4 DIDO1 DUX3 DVL1 DVL2 DVL3 DYRK2 E2F4 ECHS1 EIF4EBP1 ENKUR ESRRG FAM184A FAM47B FAM90A1 FANCM FCHSD1 GTSF1 HIF1A HSPD1 ITGB3BP JHY KCTD18 KDM4D KLC2 L3MBTL3 LARP4 LARP7 LATS1 LGALS8 LINC01139 LRP6 MAP1B MAP2K3 MAP2K4 MAP2K6 MAP2K7 MAPT MATK MBP MLLT3 MRGBP MRPL19 MRPL28 MTA1 MYL9 NCBP3 NDUFAF7 NEK1 NSL1 PADI4 PDCL PHF20L1 PIK3CB PIK3R1 PLK1 POLR2M POU5F1 PPP1R8 PRICKLE1 PRKCZ PSME3IP1 PTPN23 RAB11FIP2 RAD51AP1 RALYL RAPGEF4 RASL11B RBIS RHBDD1 RIPK2 RIT1 RPAP3 RPS6KB2 SCEL SERF1A SH3GL2 SH3GL3 SKA3 SMTNL2 SPATS2 SQSTM1 STAC STK24 STK25 STK3 STK40 STN1 STRBP STUB1 SUPT4H1 SYNJ1 TAOK3 TAS2R60 TBC1D22B TCEA2 TCP10L TGIF2LX TRAF2 TTC27 TTLL1 TUBA1A UBXN10 UFD1 UQCRB USP39 VASH2 VGLL4 VN1R1 WSB1 WT1-AS XIRP2 ZAP70 ZFAND5 ZMYM5 ZRANB2
Entrez ID		55693	120892
HPRD ID		17169	10613
Ensembl ID		ENSG00000186280	ENSG00000188906
Uniprot IDs		Q6B0I6	Q17RV3 Q5S007
PDB IDs		3DXT 3DXU 4D6Q 4D6R 4D6S 4HON 4HOO 5F5A 5F5C 5FP4 5FP7 5FP8 5FP9 5FPA 5FPB 5PH0 5PH1 5PH2 5PH3 5PH4 5PH5 5PH6 5PH7 5PH8 5PH9 5PHA 5PHB 5PHC 5PHD 5PHE 5PHF 5PHG 5PHH 5PHI 5PHJ 5PHK 5PHL 5PHM 5PHN 5PHO 5PHP 5PHQ 5PHR 5PHS 5PHT 5PHU 5PHV 5PHW 5PHX 5PHY 5PHZ 5PI0 5PI1 5PI2 5PI3 5PI4 5PI5 5PI6 5PI7 5PI8 5PI9 5PIA 5PIB 5PIC 5PID 5PIE 5PIF 5PIG 5PIH 5PII 5PIJ 5PIK 5PIL 5PIM 5PIN 5PIO 5PIP 5PIQ 5PIR 5PIS 5PIT 5PIU 5PIV 5PIW 5PIX 5PIY 5PIZ 5PJ0 5PJ1 5PJ2 5PJ3 5PJ4 5PJ5 5PJ6 5PJ7 5PJ8 5PJ9 5PJA 5PJB 5PJC 5PJD 5PJE 5PJF 5PJG 5PJH 5PJI 5PJJ 5PJK 5PJL 5PJM 5PJN 5PJO 5PJP 5PJQ 5PJR 5PJS 5PJT 5PJU 5PJV 5PJW 5PJX 5PJY 5PJZ 5PK0 5PK1 5PK2 5PK3 5PK4 5PK5 5PK6 5PK7 5PK8 5PK9 5PKA 5PKB 5PKC 5PKD 5PKE 5PKF 5PKG 5PKH 5PKI 5PKJ 5PKK 5PKL 5PKM 5PKN 5PKO 5PKP 5PKQ 5PKR 5PKS 5PKT 5PKU 5PKV 5PKW 5PKX 5PKY 5PKZ 5PL0 5PL1 5PL2 5PL3 5PL4 5PL5 5PL6 5PL7 5PL8 5PL9 5PLA 5PLB 5PLC 5PLD 5PLE 5PLF 5PLG 5PLH 5PLI 5PLJ 5PLK 5PLL 5PLM 5PLN 5PLO 5PLP 5PLQ 5PLR 5PLS 5PLT 5PLU 5PLV 5PLW 5PLX 5PLY 5PLZ 5PM0 5PM1 5PM2 5PM3 5PM4 5PM5 5PM6 5PM7 5PM8 5PM9 5PMA 5PMB 5PMC 5PMD 5PME 5PMF 5PMG 5PMH 5PMI 5PMJ 5PMK 5PML 5PMM 5PMN 5PMO 5PMP 5PMQ 5PMR 5PMS 5PMT 5PMU 5PMV 5PMW 5PMX 5PMY 5PMZ 5PN0 5PN1 5PN2 5PN3 5PN4 5PN5 5PN6 5PN7 5PN8 5PN9 5PNA 5PNB 5PNC 5PND 5PNE 5PNF 5PNG 5PNH 5PNI 5PNJ 5PNK 5PNL 5PNM 5PNN 5PNO 5PNP 5PNQ 5PNR 5PNS 5PNU 5PNV 5PNW 6ETE 6ETG 6ETS 6ETT 6ETU 6ETV 6ETW 6F5Q 6F5R 6F5S 6F5T 6H0W 6H0X 6H0Y 6H0Z 6H10 6H11	2ZEJ 3D6T 5MY9 5MYC 6DLO 6DLP 6OJE 6OJF 6VNO 6VP6 6VP7 6XR4
Enriched GO Terms of Interacting Partners?
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