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SNRNP40 and SNRNP200
Number of citations of the paper that reports this interaction (PMID
22939629
)
44
Data Source:
BioGRID
(two hybrid, biochemical)
SNRNP40
SNRNP200
Gene Name
small nuclear ribonucleoprotein 40kDa (U5)
small nuclear ribonucleoprotein 200kDa (U5)
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleoplasm
U5 SnRNP
Small Nucleolar Ribonucleoprotein Complex
Cytoplasm
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Spliceosomal Complex
U5 SnRNP
Membrane
Catalytic Step 2 Spliceosome
Molecular Function
Protein Binding
Poly(A) RNA Binding
ATP-dependent RNA Helicase Activity
Protein Binding
ATP Binding
ATP-dependent Helicase Activity
Identical Protein Binding
Poly(A) RNA Binding
Biological Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Processing
RNA Splicing
Gene Expression
Cis Assembly Of Pre-catalytic Spliceosome
MRNA Splicing, Via Spliceosome
Osteoblast Differentiation
RNA Splicing
Gene Expression
Pathways
Processing of Capped Intron-Containing Pre-mRNA
mRNA Splicing
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA
mRNA Splicing
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Alcohol dependence (
23455491
)
Protein-Protein Interactions
6 interactors:
ACP5
APP
DDR1
DHX16
EFTUD2
SNRNP200
19 interactors:
APC
BARD1
BRCA1
CHMP1B
ECT2
ERG
GRB2
LSM8
MEGF10
PIN1
PRPF8
RNF113A
SART1
SF3B2
SMNDC1
SNRNP40
USP19
YWHAB
YWHAG
Entrez ID
9410
23020
HPRD ID
08481
03391
Ensembl ID
ENSG00000060688
ENSG00000144028
Uniprot IDs
A0MNP2
B4DQJ1
Q96DI7
O75643
PDB IDs
2Q0Z
4F91
4F92
4F93
4KIT
Enriched GO Terms of Interacting Partners
?
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Splicing
Smooth Muscle Cell-matrix Adhesion
Cis Assembly Of Pre-catalytic Spliceosome
Negative Regulation Of Superoxide Anion Generation
Synaptic Growth At Neuromuscular Junction
Collateral Sprouting In Absence Of Injury
Collateral Sprouting
Axon Midline Choice Point Recognition
Smooth Endoplasmic Reticulum Calcium Ion Homeostasis
Collagen-activated Tyrosine Kinase Receptor Signaling Pathway
Riboflavin Metabolic Process
Axon Choice Point Recognition
Heterocycle Metabolic Process
Collagen-activated Signaling Pathway
Cellular Nitrogen Compound Metabolic Process
Neuron Remodeling
Smooth Muscle Cell Migration
Regulation Of Extracellular Matrix Disassembly
Regulation Of Superoxide Anion Generation
Negative Regulation Of Interleukin-1 Beta Production
Nitrogen Compound Metabolic Process
Negative Regulation Of Nitric Oxide Biosynthetic Process
Extracellular Matrix Organization
Extracellular Structure Organization
RNA Metabolic Process
Negative Regulation Of Reactive Oxygen Species Biosynthetic Process
MRNA Cis Splicing, Via Spliceosome
Cellular Copper Ion Homeostasis
Negative Regulation Of Interleukin-12 Production
Wound Healing, Spreading Of Cells
Regulation Of Extracellular Matrix Organization
Gene Expression
Muscle Cell Migration
Copper Ion Homeostasis
Suckling Behavior
Cellular Metabolic Process
Positive Regulation Of G2/M Transition Of Mitotic Cell Cycle
Mammary Gland Lobule Development
Mammary Gland Alveolus Development
Neuron Maturation
MRNA Polyadenylation
Regulation Of Epidermal Growth Factor-activated Receptor Activity
Branching Involved In Mammary Gland Duct Morphogenesis
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Regulation Of Organelle Organization
RNA Splicing
Regulation Of Cell Cycle
MRNA Processing
Regulation Of Cell Cycle Process
MRNA Metabolic Process
Cell Cycle
RNA Processing
Regulation Of Microtubule Cytoskeleton Organization
Apoptotic Process
Apoptotic Signaling Pathway
Programmed Cell Death
Cell Cycle Process
Regulation Of Microtubule-based Process
Cell Death
Death
Positive Regulation Of Organelle Organization
Intrinsic Apoptotic Signaling Pathway
Protein K6-linked Ubiquitination
Regulation Of Cytoskeleton Organization
Regulation Of Phosphorylation
Regulation Of Cell Division
Regulation Of Cellular Component Organization
Cytokinesis
Positive Regulation Of Apoptotic Process
Regulation Of Phosphorus Metabolic Process
Positive Regulation Of Programmed Cell Death
Positive Regulation Of Cell Death
Regulation Of Protein Metabolic Process
Regulation Of Mitotic Nuclear Division
Regulation Of Attachment Of Spindle Microtubules To Kinetochore
Positive Regulation Of Protein Insertion Into Mitochondrial Membrane Involved In Apoptotic Signaling Pathway
Cell Cycle Arrest
Response To Ionizing Radiation
Positive Regulation Of Protein Metabolic Process
Positive Regulation Of Mitochondrial Outer Membrane Permeabilization Involved In Apoptotic Signaling Pathway
Regulation Of Protein Localization
Intracellular Signal Transduction
Regulation Of Intracellular Transport
Cellular Component Assembly
Ribonucleoprotein Complex Assembly
Negative Regulation Of Cell Cycle
Regulation Of Mitochondrial Outer Membrane Permeabilization Involved In Apoptotic Signaling Pathway
Regulation Of Cellular Protein Metabolic Process
Cellular Response To Organonitrogen Compound
Spliceosomal SnRNP Assembly
Regulation Of Apoptotic Process
Regulation Of Centrosome Duplication
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Tagcloud (Intersection)
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