HiPPIP
Home
About
SZ Genes
People
Help
Advanced Search
LSM7 and SMN1
Number of citations of the paper that reports this interaction (PubMedID
10851237
)
49
Data Source:
HPRD
(in vitro)
LSM7
SMN1
Description
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
survival of motor neuron 1, telomeric
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
U6 SnRNP
U12-type Spliceosomal Complex
Cytosol
U4/U6 X U5 Tri-snRNP Complex
U2-type Prespliceosome
U2-type Precatalytic Spliceosome
Catalytic Step 2 Spliceosome
Spliceosomal Tri-snRNP Complex
Lsm2-8 Complex
Lsm1-7-Pat1 Complex
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Cajal Body
Nuclear Body
Z Disc
Axon
SMN Complex
SMN-Sm Protein Complex
Cytoplasmic Ribonucleoprotein Granule
Neuron Projection
Perikaryon
Gemini Of Coiled Bodies
Molecular Function
RNA Binding
Protein Binding
U6 SnRNA Binding
RNA Binding
Protein Binding
Identical Protein Binding
Biological Process
MRNA Splicing, Via Spliceosome
Nuclear-transcribed MRNA Catabolic Process
Spliceosomal Complex Assembly
Spliceosomal SnRNP Assembly
DNA-templated Transcription, Termination
Nervous System Development
Pathways
mRNA decay by 5' to 3' exoribonuclease
mRNA decay by 5' to 3' exoribonuclease
mRNA Splicing - Major Pathway
snRNP Assembly
Drugs
Nusinersen
Diseases
GWAS
Parkinson's disease (
28892059
)
Interacting Genes
26 interacting genes:
ARF6
DDIT4L
EPHA2
EXOSC6
EXOSC8
LDB1
LSM1
LSM2
LSM3
LSM4
LSM5
LSM6
LSM8
MYH13
NPY1R
PFKM
RAB29
RASSF5
SART3
SMN1
SNRPD3
SNRPF
SYT17
TACC1
TCL1B
ZSCAN26
165 interacting genes:
A1BG
A2M
ACTB
ACTL6B
ADAMTS10
AGAP1
ANXA2
APLP1
ARFGAP1
ATP5F1B
ATP6V1A
BAG6
BCL2
BLOC1S6
BYSL
C9orf72
CARHSP1
CCDC90B
CENPB
CHTOP
COIL
COL4A2
COL4A5
COPS6
CPNE6
CRIP2
CSAD
DDAH2
DDX20
DHX9
DMPK
DOCK7
DUS2
DYNC1I1
EEF1A1
EEF1A2
EHHADH
EIF3G
EXT2
EZH2
FAM20C
FAM9B
FBL
FGB
FLAD1
FNDC11
FUBP1
GAPDH
GAR1
GDF9
GEMIN2
GEMIN5
GEMIN7
H3-4
HADHB
HMGXB3
HNRNPR
HNRNPU
HNRNPUL1
IGHM
ILF3
IMMT
INPP5K
IQUB
ITCH
JADE1
KDM1A
KIF5A
KLHL5
KMT2B
KPNB1
KRTAP19-6
KRTAP19-7
KRTAP21-2
KRTAP6-1
KRTAP6-2
LENG8
LRIF1
LSM1
LSM10
LSM11
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MAGED1
MAST2
MED31
MKI67
MPP1
MRPL37
MSH2
NGFR
NKIRAS2
NMT2
NRN1
NTAQ1
OSTF1
PDE4DIP
PKM
PLXNA3
POLR1C
POLR2A
POP7
PPIG
PSME1
QARS1
RBBP4
RBBP6
RBFOX2
RBM48
REX1BD
RN7SL1
RNU1-1
RNU11
RNU2-1
RNU4-1
RPL13
RPS2
RXRA
SCARNA1
SDF4
SELENOW
SEMA5B
SETDB1
SMC5
SMN2
SNORA81
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNU13
SNUPN
SP110
SPANXN2
STRAP
STXBP2
STXBP3
SULT1A3
SUMO3
SYNCRIP
TAF1C
TERC
TIAL1
TLE1
TMSB4X
TP53
TRMT2A
TUBA1A
TUBB3
UCHL1
UNC119
USP4
VPS28
WDR18
WDR73
WIZ
ZBTB16
ZNF431
ZRANB2
ZXDC
Entrez ID
51690
6606
HPRD ID
06287
02646
Ensembl ID
ENSG00000130332
ENSG00000172062
Uniprot IDs
Q9UK45
B4DP61
E7EQZ4
Q16637
PDB IDs
3JCR
5O9Z
6AH0
6AHD
6QW6
6QX9
7ABG
1G5V
1MHN
2LEH
4A4E
4A4G
4GLI
4QQ6
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
Enriched GO Terms of Interacting Partners
?
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?