PKNOX1 and HOXD9

Number of citations of the paper that reports this interaction (PMID 9079695)
14

Data Source:
HPRD (in vivo)

		PKNOX1	HOXD9
Gene Name		PBX/knotted 1 homeobox 1	homeobox D9
Image			No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleus Transcription Factor Complex Cytoplasm	Nucleus
	Molecular Function	Sequence-specific DNA Binding Transcription Factor Activity RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding Transcription Factor Activity Sequence-specific DNA Binding Protein Heterodimerization Activity	RNA Polymerase II Regulatory Region Sequence-specific DNA Binding RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding Transcription Factor Activity Involved In Negative Regulation Of Transcription
	Biological Process	Angiogenesis Transcription From RNA Polymerase II Promoter T Cell Differentiation Erythrocyte Differentiation Camera-type Eye Development Positive Regulation Of Transcription From RNA Polymerase II Promoter	Negative Regulation Of Transcription From RNA Polymerase II Promoter Transcription, DNA-templated Single Fertilization Skeletal Muscle Tissue Development Adult Locomotory Behavior Anterior/posterior Pattern Specification Proximal/distal Pattern Formation Mammary Gland Development Embryonic Forelimb Morphogenesis Hindlimb Morphogenesis Positive Regulation Of Transcription From RNA Polymerase II Promoter Embryonic Skeletal System Morphogenesis Peripheral Nervous System Neuron Development
Pathways
Drugs
Diseases
GWAS		Biochemical measures ( 19260141) Cognitive performance ( 20125193) Information processing speed ( 21130836)	Magnesium levels ( 20700443)
Protein-Protein Interactions		15 interactors: APP HMGB2 HOXA1 HOXB6 HOXB7 HOXD9 MEIS1 PAX6 PBX1 PBX2 POU2F1 RFX3 TLX1 VPS37C ZBTB3	9 interactors: BARX1 ETV5 FAIM3 GORAB HMGB1 HOXC9 MEIS1 PBX1 PKNOX1
Entrez ID		5316	3235
HPRD ID		03653	00865
Ensembl ID		ENSG00000160199
Uniprot IDs		E7EPN6 P55347 Q6PKH2 Q96I87	P28356
PDB IDs		1X2N
Enriched GO Terms of Interacting Partners?		Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Pattern Specification Process Positive Regulation Of Cellular Biosynthetic Process Anatomical Structure Morphogenesis Regulation Of Transcription, DNA-templated Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process Gene Expression Embryonic Morphogenesis Organ Morphogenesis Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Organ Development Anterior/posterior Pattern Specification Transcription, DNA-templated RNA Biosynthetic Process RNA Metabolic Process Positive Regulation Of Cellular Metabolic Process Nucleobase-containing Compound Metabolic Process Embryonic Skeletal System Development Multicellular Organismal Development Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Anatomical Structure Development Cellular Nitrogen Compound Metabolic Process Embryo Development System Development Embryonic Organ Development Developmental Process Nitrogen Compound Metabolic Process Cell Differentiation Positive Regulation Of Metabolic Process Skeletal System Development Cellular Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Embryonic Skeletal System Morphogenesis Regulation Of Metabolic Process Embryonic Organ Morphogenesis Proximal/distal Pattern Formation Cell Development Chordate Embryonic Development Negative Regulation Of Neuron Differentiation Embryo Development Ending In Birth Or Egg Hatching Transcription From RNA Polymerase II Promoter Rhombomere Development	Immune System Development Positive Regulation Of Transcription From RNA Polymerase II Promoter Immune System Process Transcription, DNA-templated RNA Biosynthetic Process Positive Regulation Of Transcription, DNA-templated System Development Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Positive Regulation Of Macromolecule Biosynthetic Process Regulation Of RNA Biosynthetic Process Positive Regulation Of Gene Expression Regulation Of RNA Metabolic Process Anterior/posterior Pattern Specification Positive Regulation Of Cellular Biosynthetic Process Nucleobase-containing Compound Metabolic Process Spleen Development Multicellular Organismal Development Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Regulation Of Gene Expression Anatomical Structure Development Transcription From RNA Polymerase II Promoter Regulation Of Nitrogen Compound Metabolic Process Regulation Of Transcription From RNA Polymerase II Promoter Cellular Nitrogen Compound Metabolic Process RNA Metabolic Process Cell Differentiation Gene Expression Developmental Process Nitrogen Compound Metabolic Process Cellular Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Negative Regulation Of Apoptotic Cell Clearance Pattern Specification Process Regulation Of Neuron Differentiation Positive Regulation Of Cellular Metabolic Process Skeletal System Development Negative Regulation Of RNA Polymerase II Transcriptional Preinitiation Complex Assembly Hemopoiesis Generation Of Neurons Regulation Of Neurogenesis Embryonic Skeletal System Development Organ Development Negative Regulation Of DNA-templated Transcription, Initiation Negative Regulation Of Transcription Initiation From RNA Polymerase II Promoter Neurogenesis Biosynthetic Process Base-excision Repair, DNA Ligation Male Germ-line Stem Cell Asymmetric Division
Tagcloud ?		219a 5p aberration amongst confer consortium dys effectors enrichment epha4 epigenetic esr1 hsa ipa mcic microrna micrornas mind neuropsychological predicted psychiatric ranked respective schizophrenia searched sets strengthened thousands transcriptionally	aberrantly aberration adjacent autosomal beadchips bisulfite cholangiocarcinogenesis cholangiocarcinoma cpg eed epigenetically epigenomic false homeobox hoxa9 humanmethylation27 hypermethylated hypermethylation hypomethylated infinium methylomes ontology prc2 profiled pyrosequencing representing sets suz12 trimethylation
Tagcloud (Difference) ?		219a 5p amongst confer consortium dys effectors enrichment epha4 epigenetic esr1 hsa ipa mcic microrna micrornas mind neuropsychological predicted psychiatric ranked respective schizophrenia searched strengthened thousands transcriptionally	aberrantly adjacent autosomal beadchips bisulfite cholangiocarcinogenesis cholangiocarcinoma cpg eed epigenetically epigenomic false homeobox hoxa9 humanmethylation27 hypermethylated hypermethylation hypomethylated infinium methylomes ontology prc2 profiled pyrosequencing representing suz12 trimethylation
Tagcloud (Intersection) ?		aberration sets