SLC38A3 and COL6A2

Number of citations of the paper that reports this interaction (PMID 21988832)
14

Data Source:
BioGRID (two hybrid)

		SLC38A3	COL6A2
Gene Name		solute carrier family 38, member 3	collagen, type VI, alpha 2
Image		No pdb structure	No pdb structure
Gene Ontology Annotations	Cellular Component	Plasma Membrane Integral Component Of Plasma Membrane	Extracellular Region Proteinaceous Extracellular Matrix Collagen Trimer Extracellular Space Endoplasmic Reticulum Lumen Extracellular Matrix Vesicle Sarcolemma Protein Complex Extracellular Vesicular Exosome
	Molecular Function	L-histidine Transmembrane Transporter Activity L-alanine Transmembrane Transporter Activity L-asparagine Transmembrane Transporter Activity L-glutamine Transmembrane Transporter Activity Symporter Activity Antiporter Activity	Protein Binding
	Biological Process	Ion Transport Sodium Ion Transport Amino Acid Transport Asparagine Transport Glutamine Transport L-alanine Transport Histidine Transport Transmembrane Transport L-histidine Transmembrane Transport	Cell Adhesion Axon Guidance Response To Glucose Extracellular Matrix Disassembly Extracellular Matrix Organization Collagen Catabolic Process Protein Heterotrimerization
Pathways		Transport of inorganic cations/anions and amino acids/oligopeptides Amino acid transport across the plasma membrane SLC-mediated transmembrane transport	Signaling by PDGF NCAM1 interactions Collagen formation Axon guidance Collagen degradation Degradation of the extracellular matrix Assembly of collagen fibrils and other multimeric structures ECM proteoglycans Integrin cell surface interactions Collagen biosynthesis and modifying enzymes NCAM signaling for neurite out-growth
Drugs		L-Histidine L-Asparagine
Diseases
GWAS
Protein-Protein Interactions		3 interactors: COL6A2 HMGN1 SETDB1	4 interactors: ABCD3 COX6A2 FN1 SLC38A3
Entrez ID		10991	1292
HPRD ID		11980	02110
Ensembl ID			ENSG00000142173
Uniprot IDs		Q99624	P12110
PDB IDs
Enriched GO Terms of Interacting Partners?		Post-embryonic Camera-type Eye Morphogenesis Pyrimidine Dimer Repair By Nucleotide-excision Repair Post-embryonic Organ Morphogenesis Histone H3-K9 Trimethylation Post-embryonic Camera-type Eye Development Protein Heterotrimerization Response To UV-C Pyrimidine Dimer Repair Response To UV-B Histone H3-K9 Methylation Regulation Of Development, Heterochronic Inner Cell Mass Cell Proliferation Chromatin Organization Peptidyl-lysine Trimethylation Blastocyst Growth Positive Regulation Of DNA-templated Transcription, Elongation Histone H3-K9 Modification Protein Trimerization Transcription-coupled Nucleotide-excision Repair Chromosome Organization System Development Regulation Of DNA-templated Transcription, Elongation	Calcium-independent Cell-matrix Adhesion Very Long-chain Fatty Acid Catabolic Process Asparagine Transport Histidine Transport L-histidine Transmembrane Transport Glutamine Transport Transmembrane Transport Integrin Activation Transport L-alanine Transport Basic Amino Acid Transport Alanine Transport Monovalent Inorganic Cation Transport Drug Transmembrane Transport Very Long-chain Fatty Acid Metabolic Process
Tagcloud ?		acidosis adaptation ammonia appeared constitutive dominated element extracellular glutamine homeostatic instance involves latter made messenger metabolic modifications ph place regulation snat3 sp1 stabilisation stability stabilization systemic take transcriptional transporter	6365g aetiologies bethlem bioinformaticians commercialisation consumer definitively eventual expertise faced flagged geneticists gly2122val hitherto journey myopathy neuromuscular pointed pursued realising reassessment sanger sidetracked son table uncharacterised unprecedented
Tagcloud (Difference) ?		acidosis adaptation ammonia appeared constitutive dominated element extracellular glutamine homeostatic instance involves latter made messenger metabolic modifications ph place regulation snat3 sp1 stabilisation stability stabilization systemic take transcriptional transporter	6365g aetiologies bethlem bioinformaticians commercialisation consumer definitively eventual expertise faced flagged geneticists gly2122val hitherto journey myopathy neuromuscular pointed pursued realising reassessment sanger sidetracked son table uncharacterised unprecedented
Tagcloud (Intersection) ?