SF3B4 and DDX17

Number of citations of the paper that reports this interaction (PMID 22365833)
24

Data Source:
BioGRID (two hybrid)

		SF3B4	DDX17
Gene Name		splicing factor 3b, subunit 4, 49kDa	DEAD (Asp-Glu-Ala-Asp) box helicase 17
Image			No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleoplasm Spliceosomal Complex U12-type Spliceosomal Complex	Nucleus Nucleoplasm Nucleolus Membrane
	Molecular Function	Nucleotide Binding Protein Binding Poly(A) RNA Binding	Transcription Coactivator Activity RNA Binding RNA Helicase Activity Protein Binding ATP Binding RNA-dependent ATPase Activity Estrogen Receptor Binding Poly(A) RNA Binding
	Biological Process	RNA Splicing, Via Transesterification Reactions MRNA Splicing, Via Spliceosome MRNA Processing RNA Splicing Gene Expression Positive Regulation Of MRNA Splicing, Via Spliceosome	Transcription, DNA-templated RNA Processing Positive Regulation Of Intracellular Estrogen Receptor Signaling Pathway Positive Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Skeletal Muscle Cell Differentiation
Pathways		Processing of Capped Intron-Containing Pre-mRNA mRNA Splicing mRNA Splicing - Minor Pathway mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS		Height ( 20881960 18391951)
Protein-Protein Interactions		42 interactors: APBB1 BAG3 BAIAP2 BMPR1A CHERP CWF19L2 DDX17 DDX42 EFTUD2 EWSR1 FKBP1A FRK GRB2 HNRNPD HNRNPF HNRNPH1 HNRNPUL1 HSPB7 ILF3 ITSN1 MAPK9 METTL17 NCK2 NUB1 PPP1R16B PRPF40A RBM39 RBM4 SEC24D SF1 SF3B2 SRSF6 SS18L1 STK19 SUMO4 TCAF1 TCERG1 UBASH3A UBC WBP4 WDR77 ZCCHC10	28 interactors: APBB1 APP BYSL CREBBP CSNK2A1 DDX5 ESR2 FBL GRB2 HDAC1 HNRNPH3 HNRNPK LNX1 NCOA1 NCOA2 NCOA3 PIN1 RBM15 RBM4 SF1 SF3B4 SNRNP70 SORBS3 SRA1 SREK1 U2AF2 WBP11 YWHAG
Entrez ID		10262	10521
HPRD ID		12028	10532
Ensembl ID		ENSG00000143368	ENSG00000100201
Uniprot IDs		B3KUJ0 Q15427	Q59F66 Q92841
PDB IDs		1X5T 1X5U
Enriched GO Terms of Interacting Partners?		RNA Processing RNA Splicing MRNA Processing MRNA Metabolic Process MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Gene Expression RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Metabolic Process Cellular Nitrogen Compound Metabolic Process Positive Regulation Of Cellular Metabolic Process Nitrogen Compound Metabolic Process Regulation Of RNA Splicing Regulation Of RNA Metabolic Process Regulation Of Gene Expression Circadian Regulation Of Translation Regulation Of Metabolic Process Positive Regulation Of Transcription, DNA-templated Transcription, DNA-templated RNA Biosynthetic Process Enzyme Linked Receptor Protein Signaling Pathway Cellular Macromolecule Biosynthetic Process Regulation Of Nitrogen Compound Metabolic Process Positive Regulation Of Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Metabolic Process Positive Regulation Of Metabolic Process Positive Regulation Of Cellular Biosynthetic Process Regulation Of Epidermal Growth Factor Receptor Signaling Pathway Neuron Projection Development Cellular Response To Growth Factor Stimulus Regulation Of ERBB Signaling Pathway Response To Growth Factor Negative Regulation Of Protein Metabolic Process Immune System Process Response To External Stimulus Regulation Of Circadian Rhythm Regulation Of Protein Metabolic Process Transmembrane Receptor Protein Tyrosine Kinase Signaling Pathway Neuron Development Posttranscriptional Regulation Of Gene Expression Positive Regulation Of Signal Transduction Regulation Of Cellular Process Stress-activated MAPK Cascade Fc Receptor Signaling Pathway Regulation Of Cellular Protein Metabolic Process	RNA Metabolic Process MRNA Processing RNA Splicing MRNA Metabolic Process RNA Processing Gene Expression Nucleobase-containing Compound Metabolic Process Rhythmic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Positive Regulation Of Cellular Metabolic Process Positive Regulation Of Gene Expression Nitrogen Compound Metabolic Process Positive Regulation Of Metabolic Process MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Positive Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of MRNA Splicing, Via Spliceosome Regulation Of RNA Metabolic Process Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Metabolic Process Regulation Of MRNA Processing Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Intracellular Receptor Signaling Pathway Regulation Of RNA Splicing Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Cellular Metabolic Process Histone Acetylation Internal Peptidyl-lysine Acetylation Regulation Of Receptor Activity Histone Modification Peptidyl-lysine Acetylation Internal Protein Amino Acid Acetylation Cellular Metabolic Process Positive Regulation Of Macromolecule Biosynthetic Process Protein Acetylation Transcription, DNA-templated Positive Regulation Of Cellular Biosynthetic Process RNA Biosynthetic Process Cell Differentiation Regulation Of Androgen Receptor Signaling Pathway Labyrinthine Layer Morphogenesis Developmental Process Cellular Response To Hormone Stimulus Regulation Of Signal Transduction Chromatin Modification Embryonic Placenta Morphogenesis Transcription From RNA Polymerase II Promoter
Tagcloud ?			34a 3a adding auf1 contexts cpeb4 dimension doxorubicin focusing hnrnpd indirect keeps master mcf7 modulated nutlin polysomal preferentially searched srsf1 subpolysomal tardbp transcriptome translational translatome uncoupled uncoupling variations ybx1
Tagcloud (Difference) ?			34a 3a adding auf1 contexts cpeb4 dimension doxorubicin focusing hnrnpd indirect keeps master mcf7 modulated nutlin polysomal preferentially searched srsf1 subpolysomal tardbp transcriptome translational translatome uncoupled uncoupling variations ybx1
Tagcloud (Intersection) ?