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LINC00839 and PLOD3
Number of citations of the paper that reports this interaction (PubMedID
30631154
)
5
Data Source:
BioGRID
(unspecified method)
LINC00839
PLOD3
Description
long intergenic non-protein coding RNA 839
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
Image
No pdb structure
GO Annotations
Cellular Component
Extracellular Space
Endoplasmic Reticulum
Endoplasmic Reticulum Lumen
Endoplasmic Reticulum Membrane
Rough Endoplasmic Reticulum
Golgi Apparatus
Trans-Golgi Network
Collagen-containing Extracellular Matrix
Extracellular Exosome
Molecular Function
Iron Ion Binding
Protein Binding
Procollagen-lysine 5-dioxygenase Activity
L-ascorbic Acid Binding
Procollagen Glucosyltransferase Activity
Procollagen Galactosyltransferase Activity
Biological Process
In Utero Embryonic Development
Endothelial Cell Morphogenesis
Protein O-linked Glycosylation
Protein Localization
Peptidyl-lysine Hydroxylation
Neural Tube Development
Collagen Fibril Organization
Cellular Response To Hormone Stimulus
Collagen Metabolic Process
Vasodilation
Hydroxylysine Biosynthetic Process
Epidermis Morphogenesis
Oxidation-reduction Process
Lung Morphogenesis
Basement Membrane Assembly
Pathways
Collagen biosynthesis and modifying enzymes
Drugs
Vitamin C
Succinic acid
Diseases
GWAS
Blood protein levels (
30072576
)
Interacting Genes
82 interacting genes:
ADAMTS15
AKAP13
ALDH16A1
APOL3
BFSP1
CALM1
CC2D1B
CCDC168
CCDC93
CDC16
CEP192
CEP295NL
CHPF
CIZ1
CLGN
CLPTM1
COPB1
DNAH10
DPEP3
EFL1
EID2
EMX1
FAAP100
FAM13B
FBXL5
HAPLN4
IQCN
IRX4
JAKMIP2
KLK14
KRT1
KRT6B
L1CAM
MEX3A
MEX3B
MEX3C
MEX3D
MICAL2
MYO7A
NDUFA2
NOC4L
NOTCH3
NVL
OS9
P4HB
PABPN1
PALM3
PARP6
PHACTR1
PKD1L2
PLOD3
PNPLA3
POMT2
PRSS1
PRSS3
PTBP1
PTEN
PTPRA
QSOX2
RAPGEF6
RIF1
RPLP2
RPTOR
RYR2
SEMA4D
SEPTIN12
SEPTIN9
SERHL2
SLC7A14
SOWAHB
SREBF2
SYNE1
SYNE3
TAS1R3
TCF24
TMC4
TRO
UBE2S
VANGL1
YAP1
YIPF1
ZFPL1
9 interacting genes:
CCDC85B
DPPA2
EFHC2
EHMT2
FAM153A
LINC00839
RAB3IP
RHOU
RHOXF2
Entrez ID
84856
8985
HPRD ID
17516
04347
Ensembl ID
ENSG00000185904
ENSG00000106397
Uniprot IDs
O60568
Q9UG85
PDB IDs
6FXK
6FXM
6FXR
6FXT
6FXX
6FXY
Enriched GO Terms of Interacting Partners
?
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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