RPS12 and HMGB1

Number of citations of the paper that reports this interaction (PubMedID 29721183)
2

Data Source:
BioGRID (affinity chromatography technology, two hybrid)

		RPS12	HMGB1
Description		ribosomal protein S12	high mobility group box 1
Image
GO Annotations	Cellular Component	Nucleoplasm Golgi Apparatus Cytosol Membrane Cytosolic Small Ribosomal Subunit Intracellular Membrane-bounded Organelle	Nuclear Chromatin Condensed Chromosome Extracellular Region Extracellular Space Cell Nucleus Nucleoplasm Cytoplasm Endosome Endoplasmic Reticulum-Golgi Intermediate Compartment Cell Surface Transcriptional Repressor Complex Secretory Granule Lumen Alphav-beta3 Integrin-HMGB1 Complex Ficolin-1-rich Granule Lumen
	Molecular Function	RNA Binding Structural Constituent Of Ribosome	Four-way Junction DNA Binding Bubble DNA Binding Lipopolysaccharide Binding Phosphatidylserine Binding Damaged DNA Binding Double-stranded DNA Binding Single-stranded DNA Binding Transcription Coactivator Activity RNA Binding Cytokine Activity Integrin Binding Protein Binding Transcription Factor Binding DNA Binding, Bending Lyase Activity C-X-C Chemokine Binding Chemoattractant Activity Transcription Regulatory Region DNA Binding RAGE Receptor Binding DNA Polymerase Binding Repressing Transcription Factor Binding Supercoiled DNA Binding
	Biological Process	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Translation Translational Initiation SRP-dependent Cotranslational Protein Targeting To Membrane Viral Transcription	Negative Regulation Of Transcription By RNA Polymerase II Myeloid Dendritic Cell Activation Activation Of Innate Immune Response Toll-like Receptor Signaling Pathway Dendritic Cell Chemotaxis Inflammatory Response To Antigenic Stimulus Regulation Of Tolerance Induction Regulation Of T Cell Mediated Immune Response To Tumor Cell DNA Topological Change Apoptotic DNA Fragmentation DNA Recombination Chromatin Remodeling Chromatin Silencing Regulation Of Transcription, DNA-templated Regulation Of Transcription By RNA Polymerase II Autophagy Inflammatory Response Positive Regulation Of Cytosolic Calcium Ion Concentration Regulation Of Signaling Receptor Activity Positive Regulation Of Autophagy Viral Process Negative Regulation Of RNA Polymerase II Transcriptional Preinitiation Complex Assembly Neuron Projection Development Regulation Of Restriction Endodeoxyribonuclease Activity DNA Geometric Change Positive Regulation Of Mismatch Repair Developmental Process Negative Regulation Of Interferon-gamma Production Positive Regulation Of Interleukin-10 Production Positive Regulation Of Interleukin-12 Production Positive Regulation Of Interleukin-6 Production Positive Regulation Of Interleukin-8 Production Positive Regulation Of Tumor Necrosis Factor Production V(D)J Recombination Positive Regulation Of Toll-like Receptor 9 Signaling Pathway T-helper 1 Cell Activation Positive Regulation Of Activated T Cell Proliferation Positive Regulation Of Apoptotic Process Apoptotic Cell Clearance Positive Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Neutrophil Degranulation Negative Regulation Of CD4-positive, Alpha-beta T Cell Differentiation Positive Regulation Of DNA Binding Positive Regulation Of MAPK Cascade Positive Regulation Of Blood Vessel Endothelial Cell Migration Negative Regulation Of Blood Vessel Endothelial Cell Migration T-helper 1 Cell Differentiation Innate Immune Response Positive Regulation Of Innate Immune Response Positive Regulation Of Transcription By RNA Polymerase II Positive Regulation Of JNK Cascade Positive Regulation Of Interleukin-1 Secretion Positive Regulation Of Interleukin-1 Beta Secretion Positive Chemotaxis DNA Ligation Involved In DNA Repair Positive Regulation Of DNA Ligation Cell Chemotaxis Positive Regulation Of ERK1 And ERK2 Cascade Cellular Response To Lipopolysaccharide Positive Regulation Of Monocyte Chemotaxis Neutrophil Clearance Positive Regulation Of NIK/NF-kappaB Signaling Positive Regulation Of Interferon-alpha Secretion Positive Regulation Of Vascular Endothelial Cell Proliferation Tumor Necrosis Factor Secretion Positive Regulation Of Chemokine (C-X-C Motif) Ligand 2 Production Negative Regulation Of Apoptotic Cell Clearance Positive Regulation Of Interleukin-6 Secretion Positive Regulation Of Dendritic Cell Differentiation
Pathways		L13a-mediated translational silencing of Ceruloplasmin expression Peptide chain elongation SRP-dependent cotranslational protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane Viral mRNA Translation Selenocysteine synthesis Major pathway of rRNA processing in the nucleolus and cytosol Translation initiation complex formation Formation of a pool of free 40S subunits Formation of the ternary complex, and subsequently, the 43S complex Ribosomal scanning and start codon recognition GTP hydrolysis and joining of the 60S ribosomal subunit Eukaryotic Translation Termination Regulation of expression of SLITs and ROBOs Response of EIF2AK4 (GCN2) to amino acid deficiency Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)	Apoptosis induced DNA fragmentation TAK1 activates NFkB by phosphorylation and activation of IKKs complex Regulation of TLR by endogenous ligand Neutrophil degranulation Advanced glycosylation endproduct receptor signaling Advanced glycosylation endproduct receptor signaling TRAF6 mediated NF-kB activation
Drugs			Ethyl pyruvate
Diseases
GWAS		Facial morphology traits (63 three-dimensional facial segments) ( 29459680) Heel bone mineral density ( 30598549) Parkinson's disease or first degree relation to individual with Parkinson's disease ( 31701892) Type 2 diabetes nephropathy ( 21150874)	Blood osmolality (transformed sodium) ( 28360221) Carotid plaque burden ( 28282560) Hippocampal volume ( 21116278) Mean corpuscular hemoglobin ( 27863252) Mean corpuscular volume ( 27863252) Type 2 diabetes ( 30297969) Urate levels ( 31578528)
Interacting Genes		3 interacting genes: APP HMGB1 IKBKG	94 interacting genes: ACBD3 AGER AGTRAP AR ATOH1 C1QBP C3 CASP3 CCAR1 CDK1 CEBPB CREBBP CRMP1 CSNK1A1 CTCF CTNNBL1 CUX1 DNM2 DNMT1 EIF1 ENAH EP300 ERF ERG28 FIP1L1 FOXA3 FOXC1 GTF2A1 HES1 HMGA1 HNRNPK HOXB1 HOXB3 HOXC6 HOXD10 HOXD11 HOXD3 HOXD8 HOXD9 HPF1 HR HSPA5 IRF2 KRT7 LRIF1 MECP2 MNT MT2A NCAN NEUROD6 NEXN NFKB1 NR3C1 PCOLCE PGR PLAT PLG POU5F1 PPP2R3A PRKCA PRKDC PSEN1 PTPRZ1 RAD23B RAG1 RASSF4 RB1 RBPJ RELA RFX1 RPL29 RPS12 RPS20 SIX5 SOX18 SPINT1 TAF1 TBP TERF2 TERF2IP TFE3 TGIF1 TLE1 TLE2 TLE5 TLR2 TLR4 TP53 TP73 UBE2I UNC119 ZFP36 ZNF24 ZNF428
Entrez ID		6206	3146
HPRD ID		04714	01228
Ensembl ID		ENSG00000112306	ENSG00000189403
Uniprot IDs		P25398	A0A024RDR0 P09429
PDB IDs		4V6X 5A2Q 5AJ0 5FLX 5LKS 5OA3 5T2C 5VYC 6EK0 6FEC 6G18 6G51 6G53 6G5H 6G5I 6IP5 6IP6 6IP8 6OLE 6OLF 6OLG 6OLI 6OLZ 6OM0 6OM7 6QZP	2LY4 2RTU 2YRQ 6CG0 6CIJ 6CIK 6CIL 6CIM
Enriched GO Terms of Interacting Partners?
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